FastQCFastQC Report
Sun 11 Sep 2022
EGAF00001829719

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00001829719
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences2245404
Sequences flagged as poor quality0
Sequence length151
%GC45

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[WARN]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT88940.39609798503966326No Hit
TATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT58320.2597305429223427No Hit
GGTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT30250.1347196317455567No Hit

[WARN]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)