FastQCFastQC Report
Sun 11 Sep 2022
EGAF00001829750

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00001829750
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences1942903
Sequences flagged as poor quality0
Sequence length151
%GC45

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT52390.26964804727770764No Hit
TATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT35830.18441476491621042No Hit
ATTTAGGGCTATTGATATTTAACAAATATCCAGCAAAGGTTTTTCCAGGA20670.10638719483165139No Hit

[WARN]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)