FastQCFastQC Report
Sun 4 Sep 2022
EGAF00001829843

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00001829843
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences1260943
Sequences flagged as poor quality0
Sequence length151
%GC45

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[WARN]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT48920.38796361136070384No Hit
TATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT30340.24061357254055102No Hit
GGTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT16850.13363014823033237No Hit

[WARN]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)