FastQCFastQC Report
Sun 11 Sep 2022
EGAF00001830206

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00001830206
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences1868178
Sequences flagged as poor quality0
Sequence length151
%GC45

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
GTATAAGGTGATCGCAGGTTGTGCAATCATTGCTCAAAAGGGTGTACACC23060.1234357753918524No Hit
GCCTAGTACTGTGCGCCAATTAGGTCGTCATTGCGCCAGCTCGTCAGCGC22220.1189394158372489No Hit
GTACTAGGCATCGTCATCCAATGCGACGAGTCCTACACTATCTTGGATAT20020.10716323605138268No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)