FastQCFastQC Report
Mon 5 Sep 2022
EGAF00001830686

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00001830686
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences4374253
Sequences flagged as poor quality0
Sequence length151
%GC48

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT141690.3239181638556343No Hit
TATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT67480.15426633987563135No Hit
GGTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT47700.10904719045743354No Hit

[FAIL]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)