FastQCFastQC Report
Mon 12 Sep 2022
EGAF00001830703

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00001830703
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences3257247
Sequences flagged as poor quality0
Sequence length151
%GC46

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[WARN]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT143020.43908245214440295No Hit
TATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT109190.33522173786636383No Hit
GGTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT81280.24953588106766236No Hit

[FAIL]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)