FastQCFastQC Report
Mon 5 Sep 2022
EGAF00001831806

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00001831806
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences4406352
Sequences flagged as poor quality0
Sequence length151
%GC47

[OK]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[WARN]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT90930.20636118040501533No Hit
TATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT51890.117761812946401No Hit
GAATAACGCCGCCGCATCGCCGGTCGGCATCGTTTATGGTCGGAACTACG44930.101966433911771No Hit

[FAIL]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)