FastQCFastQC Report
Wed 8 May 2024
EGAF00001832090

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00001832090
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences2036223
Total Bases307.4 Mbp
Sequences flagged as poor quality0
Sequence length151
%GC46

[OK]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[WARN]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT57610.28292578956234166No Hit
TATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT31170.1530775362030583No Hit

[WARN]Adapter Content

Adapter graph

Produced by FastQC (version 0.12.1)