FastQCFastQC Report
Sun 11 Sep 2022
EGAF00001832528

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00001832528
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences1612272
Sequences flagged as poor quality0
Sequence length151
%GC46

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[WARN]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
ATATAGTATAGCTTCCCATCTTCTTTGAGAGTTGTTGGTTTATGCTCATC36340.2253962110611609No Hit
ATACTATATAGGTGGCTATCTATCCCTACCAAGGCTTATATTGAAGTATA32010.19853970049718656No Hit
CCTATATAGTATAGCTTCCCATCTTCTTTGAGAGTTGTTGGTTTATGCTC31750.19692706937787172No Hit
CTATATAGGTGGCTATCTATCCCTACCAAGGCTTATATTGAAGTATAAAC24640.15282781069199242No Hit
CTATTAATGATATTAAAATCCCAACTATACCAAAGAATATCCCAATTATC20810.12907251381900822No Hit
ATTTAGGGCTATTGATATTTAACAAATATCCAGCAAAGGTTTTTCCAGGA18910.1172879017932458No Hit
GTCTTAGCAGTAGTTTATAAGGAATATATCCCATTTTTAGTTATAATGAT16710.10364256155288934No Hit

[FAIL]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)