FastQCFastQC Report
Sun 11 Sep 2022
EGAF00001832542

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00001832542
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences2051525
Sequences flagged as poor quality0
Sequence length151
%GC46

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
ATATAGTATAGCTTCCCATCTTCTTTGAGAGTTGTTGGTTTATGCTCATC36110.17601540317568637No Hit
ATACTATATAGGTGGCTATCTATCCCTACCAAGGCTTATATTGAAGTATA32520.15851622573451457No Hit
CCTATATAGTATAGCTTCCCATCTTCTTTGAGAGTTGTTGGTTTATGCTC30900.15061966098390223No Hit
ATTTAGGGCTATTGATATTTAACAAATATCCAGCAAAGGTTTTTCCAGGA26050.1269787109589208No Hit
CTATATAGGTGGCTATCTATCCCTACCAAGGCTTATATTGAAGTATAAAC25640.1249801976578399No Hit
CTATTAATGATATTAAAATCCCAACTATACCAAAGAATATCCCAATTATC21350.10406892433677385No Hit

[WARN]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)