FastQCFastQC Report
Sun 11 Sep 2022
EGAF00001833524

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00001833524
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences2348511
Sequences flagged as poor quality0
Sequence length151
%GC46

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
ATATAGTATAGCTTCCCATCTTCTTTGAGAGTTGTTGGTTTATGCTCATC29240.12450442003465174No Hit
ATACTATATAGGTGGCTATCTATCCCTACCAAGGCTTATATTGAAGTATA26820.11420001865011489No Hit
CCTATATAGTATAGCTTCCCATCTTCTTTGAGAGTTGTTGGTTTATGCTC25400.10815363436662634No Hit

[WARN]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)