FastQCFastQC Report
Wed 8 May 2024
EGAF00001834042

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00001834042
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences2024049
Total Bases305.6 Mbp
Sequences flagged as poor quality0
Sequence length151
%GC45

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[WARN]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT50220.24811652287074076No Hit
TATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT33840.1671896283143343No Hit

[FAIL]Adapter Content

Adapter graph

Produced by FastQC (version 0.12.1)