FastQCFastQC Report
Fri 9 Sep 2022
EGAF00001834043

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00001834043
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences1695235
Sequences flagged as poor quality0
Sequence length151
%GC45

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[WARN]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT107120.6318887941789781No Hit
TATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT68230.40248107194577737No Hit
GGTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT47940.28279265116635743No Hit

[FAIL]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)