FastQCFastQC Report
Thu 9 May 2024
EGAF00001834073

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00001834073
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences1772614
Total Bases267.6 Mbp
Sequences flagged as poor quality0
Sequence length151
%GC44

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[WARN]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT60630.34203723991799684No Hit
TATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT38180.21538812172305985No Hit
GGTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT19790.11164303113932306No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.12.1)