FastQCFastQC Report
Sun 11 Sep 2022
EGAF00001834420

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00001834420
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences1588816
Sequences flagged as poor quality0
Sequence length151
%GC45

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[WARN]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
ATATAGTATAGCTTCCCATCTTCTTTGAGAGTTGTTGGTTTATGCTCATC27720.17446954209927393No Hit
ATACTATATAGGTGGCTATCTATCCCTACCAAGGCTTATATTGAAGTATA27450.17277016344246282No Hit
CCTATATAGTATAGCTTCCCATCTTCTTTGAGAGTTGTTGGTTTATGCTC25970.16345505080512784No Hit
CTATATAGGTGGCTATCTATCCCTACCAAGGCTTATATTGAAGTATAAAC22010.13853083050523157No Hit
ATTTAGGGCTATTGATATTTAACAAATATCCAGCAAAGGTTTTTCCAGGA18130.1141101298073534No Hit
CTATTAATGATATTAAAATCCCAACTATACCAAAGAATATCCCAATTATC16710.105172656871532No Hit

[FAIL]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)