FastQCFastQC Report
Thu 1 Sep 2022
EGAF00001834815

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00001834815
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences2835
Sequences flagged as poor quality0
Sequence length151
%GC45

[OK]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT210.7407407407407408No Hit
TATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT200.7054673721340388No Hit
GGTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT100.3527336860670194No Hit
GTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT60.21164021164021166No Hit
GTAGTGGGGTGAGGCTTGGATTAGCGTTTAGAAGGGCTATTTGTTGTGGG30.10582010582010583No Hit
AATTAATACCAATAGAAGGGCAATGCTTTTAGATTAAAATGAAGGTGACT30.10582010582010583No Hit
GAATAACGCCGCCGCATCGCCGGTCGGCATCGTTTATGGTCGGAACTACG30.10582010582010583No Hit
CTCTTGTACTACACTGAATTCACCCCCACTGAAAAAGATGAGTATGCCTG30.10582010582010583No Hit
CTTATACACTTACACTTTATGCACAAAATGTAGGGTTATAATAATGTTAA30.10582010582010583No Hit
GTACAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT30.10582010582010583No Hit
ACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT30.10582010582010583No Hit
TACTCATCTTTTTCAGTGGGGGTGAATTCAGTGTAGTACAAGAGATAGAA30.10582010582010583No Hit
CTTCCAGTTTTCCACTTCAAACTTCTATCTTCTCCAAATTGTTTCATCCT30.10582010582010583No Hit
TATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTA30.10582010582010583No Hit

[WARN]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)