FastQCFastQC Report
Thu 1 Sep 2022
EGAF00001834816

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00001834816
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences2835
Sequences flagged as poor quality0
Sequence length151
%GC46

[WARN]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
GATTAAGAGGGACGGCCGGGGGCATTCGTATTGCGCCGCTAGAGGTGAAA40.14109347442680778No Hit
CTTTTTAAAAGATCGCCTTCAAATTATTTTAATCACCTACAACTTTTAAA40.14109347442680778No Hit
TACTCACGTCATCCAGCAGAGAATGGAAAGTCAAATTTCCTGAATTGCTA30.10582010582010583No Hit
GTATGTAAATTGGAAGTTAACTTATGCACGCTTAACTATCTTAACAAGCT30.10582010582010583No Hit
CTTAAACAGCTTAAAGTTTAGTTTAAAAGTTGTAGGTGATTAAAATAATT30.10582010582010583No Hit

[WARN]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)