Basic Statistics
Measure | Value |
---|---|
Filename | EGAF00001836308 |
File type | Conventional base calls |
Encoding | Sanger / Illumina 1.9 |
Total Sequences | 26721121 |
Sequences flagged as poor quality | 0 |
Sequence length | 6 |
%GC | 50 |
Per base sequence quality
Per tile sequence quality
Per sequence quality scores
Per base sequence content
Per sequence GC content
Per base N content
Sequence Length Distribution
Sequence Duplication Levels
Overrepresented sequences
Sequence | Count | Percentage | Possible Source |
---|---|---|---|
ACAGCC | 477002 | 1.7851122338767151 | No Hit |
TTCTAC | 468672 | 1.7539383920307836 | No Hit |
AACTAG | 456220 | 1.7073385506543681 | No Hit |
CCTCGG | 441186 | 1.6510759410131033 | No Hit |
GAGTGA | 415064 | 1.553318066259271 | No Hit |
TATGGT | 399454 | 1.4948998584303406 | No Hit |
CTTCAC | 395104 | 1.4786206012839058 | No Hit |
GAGTCG | 390531 | 1.4615067983113432 | No Hit |
TACAGT | 386281 | 1.4456017769613783 | No Hit |
TACGGC | 356800 | 1.3352733218041264 | No Hit |
GTTACA | 352220 | 1.3181333223258112 | No Hit |
AATTGC | 341319 | 1.2773378781526419 | No Hit |
TGCGAC | 336344 | 1.2587196472782711 | No Hit |
GTCTCA | 334679 | 1.2524886212670494 | No Hit |
GTACTT | 316909 | 1.1859869202343718 | No Hit |
TACTCG | 310812 | 1.1631697637236103 | No Hit |
ATTCGA | 307463 | 1.1506366068998377 | No Hit |
TAGAGC | 305639 | 1.1438105459722292 | No Hit |
CCGGAA | 290408 | 1.0868106918119191 | No Hit |
CTGAGG | 290096 | 1.0856430761269333 | No Hit |
GCATAA | 287337 | 1.0753179105023327 | No Hit |
AGAACG | 287157 | 1.0746442860686871 | No Hit |
CGTACT | 272553 | 1.0199908903522423 | No Hit |
GCTCAA | 271355 | 1.0155075455105345 | No Hit |
TTCACA | 269650 | 1.009126825180725 | No Hit |
CAACGG | 269424 | 1.0082810522807033 | No Hit |
ACGTAA | 263439 | 0.9858830398619878 | No Hit |
GGCCGT | 262820 | 0.98356652028184 | No Hit |
AGTAGG | 258473 | 0.9672984902092994 | No Hit |
TCCAGA | 254336 | 0.9518163553093449 | No Hit |
TCTTCA | 252589 | 0.9452784559450181 | No Hit |
GATTCA | 251815 | 0.9423818708803423 | No Hit |
CAAGGA | 243993 | 0.9131091468804771 | No Hit |
TGACAC | 241722 | 0.9046102519426487 | No Hit |
AGGTCA | 238436 | 0.8923128636706521 | No Hit |
TTAGCG | 229339 | 0.8582686332657975 | No Hit |
CCATGA | 228133 | 0.8537553495603721 | No Hit |
AACTCT | 222043 | 0.8309643895553633 | No Hit |
CCAGCG | 219007 | 0.8196025907745412 | No Hit |
GCCTGG | 215155 | 0.8051870278945259 | No Hit |
CCACTT | 211793 | 0.7926052204172123 | No Hit |
TGTGAT | 204431 | 0.7650539810811081 | No Hit |
CCTGAC | 197623 | 0.7395760080574464 | No Hit |
GTCGAG | 191198 | 0.7155313581342639 | No Hit |
GGCAGG | 189828 | 0.7104043277226281 | No Hit |
TCATGT | 188854 | 0.7067592710650126 | No Hit |
TCCTCC | 188546 | 0.7056066248118856 | No Hit |
CACCTA | 180208 | 0.6744028441022366 | No Hit |
CTCCGC | 176917 | 0.6620867440404166 | No Hit |
GTGGTG | 173875 | 0.6507024911118063 | No Hit |
AACATA | 169027 | 0.632559539698952 | No Hit |
TGCGGA | 168204 | 0.6294795790940058 | No Hit |
CGCTTG | 166762 | 0.6240830989089118 | No Hit |
GTTGGC | 165109 | 0.6178969811932665 | No Hit |
CATGAG | 163670 | 0.6125117280820667 | No Hit |
GCGTAT | 162308 | 0.6074146365341484 | No Hit |
CTTAGC | 161949 | 0.6060711300248219 | No Hit |
ATGTGA | 161186 | 0.6032157108977576 | No Hit |
AGAGGT | 160610 | 0.6010601127100917 | No Hit |
GCGCAG | 158251 | 0.59223189027137 | No Hit |
AGTTCC | 157713 | 0.5902185016863627 | No Hit |
TTCCAT | 157588 | 0.5897507069407755 | No Hit |
ATTGCT | 156901 | 0.5871797070190281 | No Hit |
GCACAT | 155405 | 0.5815811395038405 | No Hit |
TCTCGC | 153482 | 0.5743845851377268 | No Hit |
CCTTAT | 150870 | 0.5646095461339365 | No Hit |
GCGGCT | 150236 | 0.5622368911843182 | No Hit |
AGATGC | 149751 | 0.5604218475714399 | No Hit |
ATACCT | 148943 | 0.5573980223359641 | No Hit |
AGGTGT | 148100 | 0.554243214571724 | No Hit |
AGCCTA | 146101 | 0.5467622410002934 | No Hit |
AAGTTG | 144774 | 0.5417961319811396 | No Hit |
GACCAT | 143259 | 0.5361264596646226 | No Hit |
GGTAAT | 141744 | 0.5304567873481056 | No Hit |
CATAAC | 141496 | 0.5295286825728606 | No Hit |
CCGACT | 138020 | 0.5165202462875715 | No Hit |
CCTGCT | 135110 | 0.5056299846103013 | No Hit |
GAATAC | 134642 | 0.5038785610828229 | No Hit |
AAGCGC | 134590 | 0.5036839584686585 | No Hit |
GCTGTC | 134064 | 0.5017154781792276 | No Hit |
GTCTGC | 128292 | 0.48011458800699264 | No Hit |
TTAGTA | 127942 | 0.47880476271934846 | No Hit |
CAGTCC | 127309 | 0.47643585012769485 | No Hit |
GACTAA | 127271 | 0.4762936405250363 | No Hit |
GGCGTT | 127134 | 0.4757809374838728 | No Hit |
ACTAAT | 126128 | 0.4720161253713869 | No Hit |
AGTTAG | 123438 | 0.4619491824463502 | No Hit |
AAGAGG | 122635 | 0.45894406900069795 | No Hit |
AGGCTT | 121993 | 0.4565414751873621 | No Hit |
GAGATA | 115272 | 0.4313890873066291 | No Hit |
GCTTCT | 113883 | 0.42619095209366403 | No Hit |
CAGTAG | 112762 | 0.421995768815238 | No Hit |
CCGCTC | 109995 | 0.41164066432691954 | No Hit |
ATCAGC | 107386 | 0.4018768523970233 | No Hit |
ATGGCC | 107102 | 0.4008140227350492 | No Hit |
ACCTGC | 101042 | 0.37813533346898137 | No Hit |
ATTGAA | 98782 | 0.36967760446876463 | No Hit |
AACCTT | 98598 | 0.3689890106032602 | No Hit |
GGCCAG | 98342 | 0.36803096696429766 | No Hit |
TCGTGG | 96788 | 0.3622153426871575 | No Hit |
CTAGTT | 96712 | 0.36193092348184047 | No Hit |
CATTAA | 96201 | 0.3600185785618799 | No Hit |
TCGGAC | 95752 | 0.3583382598357307 | No Hit |
AATCGG | 95717 | 0.3582072773069663 | No Hit |
CTGTAT | 94902 | 0.3551572555657377 | No Hit |
CGACAA | 93647 | 0.3504605963200421 | No Hit |
ATGCCG | 90565 | 0.33892664907284387 | No Hit |
TAATGA | 90150 | 0.3373735705174944 | No Hit |
AGACGG | 89915 | 0.3364941163957904 | No Hit |
GAACCG | 88393 | 0.33079824757352055 | No Hit |
CGAATT | 87811 | 0.32862019523806657 | No Hit |
CAAGCT | 87554 | 0.3276584092411392 | No Hit |
CGTCTC | 87038 | 0.32572735253135526 | No Hit |
ACTAGC | 86678 | 0.32438010366406406 | No Hit |
TTCTGT | 86252 | 0.32278585917110286 | No Hit |
AGTCAA | 83811 | 0.3136507633792759 | No Hit |
GACACG | 83082 | 0.3109225844230113 | No Hit |
AGTGCA | 81547 | 0.3051780649472004 | No Hit |
TGTGTG | 81451 | 0.3048187985825894 | No Hit |
GGTGGT | 80426 | 0.3009828816687743 | No Hit |
AGGACT | 78784 | 0.2948379298907407 | No Hit |
TCAAGC | 78332 | 0.2931463840906974 | No Hit |
CTACCG | 77243 | 0.28907095626714163 | No Hit |
TGATAA | 77106 | 0.28855825322597806 | No Hit |
ACCAGG | 74224 | 0.27777277757171936 | No Hit |
GCCATA | 73919 | 0.27663135839248665 | No Hit |
GAGAAG | 73032 | 0.2733118868777998 | No Hit |
GTAAGA | 70647 | 0.2643863631319958 | No Hit |
AACAAT | 69600 | 0.2604681143429574 | No Hit |
TACGAA | 69162 | 0.2588289615544198 | No Hit |
ACCGCT | 68483 | 0.2562879004963901 | No Hit |
TCAATG | 67126 | 0.2512095207382954 | No Hit |
AAGCAT | 66420 | 0.2485674160152188 | No Hit |
CGTTGC | 65527 | 0.24522549035274382 | No Hit |
AATGTA | 65448 | 0.24492984407353272 | No Hit |
GACTTG | 65238 | 0.2441439489009462 | No Hit |
CTGGAG | 64593 | 0.24173012801371618 | No Hit |
GGATTC | 64119 | 0.23995625033844953 | No Hit |
CACATT | 62492 | 0.2338674339298864 | No Hit |
CCGTCG | 61943 | 0.23181287940726739 | No Hit |
TATTCT | 61876 | 0.23156214142363266 | No Hit |
ATTCAT | 61736 | 0.23103821130857496 | No Hit |
CTGTTC | 59082 | 0.2211059932702674 | No Hit |
GGACTA | 57987 | 0.21700811129892342 | No Hit |
TTACGT | 57512 | 0.21523049126569205 | No Hit |
ATCCGG | 56948 | 0.21311980137360256 | No Hit |
ATCCAC | 55873 | 0.20909676656155257 | No Hit |
TGCATA | 55746 | 0.20862148710003597 | No Hit |
TAAGTC | 55568 | 0.20795534738231977 | No Hit |
CATACG | 54359 | 0.2034308366030003 | No Hit |
TTCGTT | 53901 | 0.20171683665516876 | No Hit |
TTGAAT | 52401 | 0.1961032997081223 | No Hit |
CAGCCT | 52123 | 0.19506292419393634 | No Hit |
CTATGC | 50937 | 0.19062448764780487 | No Hit |
TATAAG | 49641 | 0.18577439172555674 | No Hit |
GACCGA | 49496 | 0.18523174982067556 | No Hit |
GGTACC | 49041 | 0.18352897694673811 | No Hit |
GAGCAC | 47436 | 0.17752249241339838 | No Hit |
CTATTA | 44867 | 0.16790837480209006 | No Hit |
GTACGC | 42478 | 0.15896788162442735 | No Hit |
GATCCT | 42171 | 0.15781897772926518 | No Hit |
CGTGAA | 41116 | 0.15387079007650914 | No Hit |
AAGGCG | 40093 | 0.15004235787862344 | No Hit |
CGAAGC | 38812 | 0.1452483973258457 | No Hit |
TGGCAT | 37201 | 0.1392194586447178 | No Hit |
TATTGG | 36990 | 0.13842982111416657 | No Hit |
CGAGCC | 32499 | 0.12162289149470938 | No Hit |
GGATCG | 32469 | 0.12151062075576845 | No Hit |
ACGAAC | 32082 | 0.12006232822343045 | No Hit |
GAGCCA | 30961 | 0.11586714494500436 | No Hit |
CAGGAC | 30802 | 0.11527211002861744 | No Hit |
CTCGTC | 30323 | 0.11347952056352725 | No Hit |
ACACGA | 29182 | 0.10920949012580722 | No Hit |
ACGCTA | 29075 | 0.10880905782358458 | No Hit |
GAAGAT | 28833 | 0.10790340719612775 | No Hit |
Adapter Content
Can't analyse adapters as read length is too short (12 vs 0)