FastQCFastQC Report
Thu 30 May 2024
EGAF00001847429

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00001847429
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences114178704
Total Bases8.5 Gbp
Sequences flagged as poor quality0
Sequence length75
%GC49

[OK]Per base sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
GATCGGAAGAGCGTCGTGTAGGGAAAGAGTGTAGATCTCGGTGGTCGCCG13817681.2101801400723553Illumina Single End PCR Primer 1 (100% over 50bp)
TGACGACCTACGCACACGAGAACATGCCTCTCGCAAAGGATCTCCTTCAT2617100.22921086930536538No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.12.1)