FastQCFastQC Report
Sun 4 Sep 2022
EGAF00001850649

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00001850649
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences1183189
Sequences flagged as poor quality0
Sequence length151
%GC45

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT104430.8826146963840941No Hit
TATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT70800.5983828450061656No Hit
GGTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT58220.49206001746128475No Hit
ACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT17030.1439330487352401No Hit
GTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT16660.14080590674862595No Hit
CTTATACACTTACACTTTATGCACAAAATGTAGGGTTATAATAATGTTAA13140.11105579920029683No Hit
GATTAATACAACTACTTAAAAAATATAGTCAATAGGTTACTAAGATATTG12690.10725251840576612No Hit
GAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT12560.10615379284290168No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)