FastQCFastQC Report
Mon 12 Sep 2022
EGAF00001852394

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00001852394
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences3553889
Sequences flagged as poor quality0
Sequence length151
%GC49

[OK]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
ATATTAAAGTTGCTGCAGTTAAAAAGCTCGTAGTTGGATCTTGGGAGCGG41390.1164639638435528No Hit
GATTAAGAGGGACGGCCGGGGGCATTCGTATTGCGCCGCTAGAGGTGAAA40090.11280599928697829No Hit
GAATAACGCCGCCGCATCGCCGGTCGGCATCGTTTATGGTCGGAACTACG37670.10599655757397036No Hit

[WARN]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)