FastQCFastQC Report
Thu 9 May 2024
EGAF00001853824

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00001853824
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences1421457
Total Bases214.6 Mbp
Sequences flagged as poor quality0
Sequence length151
%GC46

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[WARN]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT35850.25220601115615876No Hit
TATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT21530.15146430739726915No Hit

[WARN]Adapter Content

Adapter graph

Produced by FastQC (version 0.12.1)