FastQCFastQC Report
Sun 4 Sep 2022
EGAF00001854278

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00001854278
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences925043
Sequences flagged as poor quality0
Sequence length151
%GC45

[WARN]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[WARN]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT20000.21620616555122302No Hit
TATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT14560.15739808852129036No Hit
GGTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT10270.11102186601055301No Hit
GATTAATACAACTACTTAAAAAATATAGTCAATAGGTTACTAAGATATTG10190.11015704134834813No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)