FastQCFastQC Report
Sun 11 Sep 2022
EGAF00001854744

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00001854744
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences1877949
Sequences flagged as poor quality0
Sequence length101
%GC47

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[WARN]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
GAATAACGCCGCCGCATCGCCGGTCGGCATCGTTTATGGTCGGAACTACG27010.14382712203579545No Hit
GATTAAGAGGGACGGCCGGGGGCATTCGTATTGCGCCGCTAGAGGTGAAA21910.11666983501681888No Hit

[WARN]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)