FastQCFastQC Report
Sun 11 Sep 2022
EGAF00001855066

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00001855066
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences1719379
Sequences flagged as poor quality0
Sequence length151
%GC47

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[WARN]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT24610.1431330730455589No Hit
GATTAAGAGGGACGGCCGGGGGCATTCGTATTGCGCCGCTAGAGGTGAAA17350.1009085256944513No Hit
GAATAACGCCGCCGCATCGCCGGTCGGCATCGTTTATGGTCGGAACTACG17330.10079220462736838No Hit

[WARN]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)