FastQCFastQC Report
Sun 4 Sep 2022
EGAF00001855548

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00001855548
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences1057000
Sequences flagged as poor quality0
Sequence length151
%GC48

[WARN]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[WARN]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
CTCTTAATCATGGCCTCAGTTCCGAAAACCAACAAAATAGAACCGCGGTC14000.13245033112582782No Hit
ATATTAAAGTTGCTGCAGTTAAAAAGCTCGTAGTTGGATCTTGGGAGCGG12260.11598864711447493No Hit
GATTAAGAGGGACGGCCGGGGGCATTCGTATTGCGCCGCTAGAGGTGAAA10900.10312204351939451No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)