FastQCFastQC Report
Sun 4 Sep 2022
EGAF00001855571

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00001855571
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences958918
Sequences flagged as poor quality0
Sequence length151
%GC46

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT103871.0832000233596615No Hit
TATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT81920.8542961963379558No Hit
GGTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT54550.5688703309354919No Hit
ACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT18920.1973057133143814No Hit
GTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT18790.19595001866687245No Hit
GAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT13820.14412076945056826No Hit
ATTATAACCCTACATTTTGTGCATAAAGTGTAAGTGTATAAGCATATCAA9960.1038670668399175No Hit
CTTATACACTTACACTTTATGCACAAAATGTAGGGTTATAATAATGTTAA9920.10344993002529934No Hit
ACACTGAATTCACCCCCACTGAAAAAGATGAGTATGCCTGCCGTGTGAAC9650.10063425652662689No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)