FastQCFastQC Report
Mon 5 Sep 2022
EGAF00001856558

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00001856558
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences1361968
Sequences flagged as poor quality0
Sequence length151
%GC46

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT26940.19780200415868804No Hit
ATTTAGGGCTATTGATATTTAACAAATATCCAGCAAAGGTTTTTCCAGGA18900.13876978020041586No Hit
TATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT18860.13847608754390706No Hit
CCTATATAGTATAGCTTCCCATCTTCTTTGAGAGTTGTTGGTTTATGCTC16050.11784417842416268No Hit
ATATAGTATAGCTTCCCATCTTCTTTGAGAGTTGTTGGTTTATGCTCATC15190.11152978630922313No Hit
CTATTAATGATATTAAAATCCCAACTATACCAAAGAATATCCCAATTATC13630.10007577270537928No Hit

[WARN]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)