FastQCFastQC Report
Sun 11 Sep 2022
EGAF00001857389

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00001857389
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences1781421
Sequences flagged as poor quality0
Sequence length101
%GC47

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[WARN]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
GAATAACGCCGCCGCATCGCCGGTCGGCATCGTTTATGGTCGGAACTACG23940.13438709883851152No Hit
GATTAAGAGGGACGGCCGGGGGCATTCGTATTGCGCCGCTAGAGGTGAAA21750.12209354217784565No Hit
GAATAGGACCGCGGTTCTATTTTGTTGGTTTTCGGAACTGAGGCCATGAT18020.10115520138136914No Hit

[WARN]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)