FastQCFastQC Report
Mon 5 Sep 2022
EGAF00001857581

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00001857581
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences1723944
Sequences flagged as poor quality0
Sequence length101
%GC46

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[WARN]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT41210.23904488776897628No Hit
GGTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT24100.1397957242230606No Hit
TATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT18230.10574589429819066No Hit

[WARN]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)