FastQCFastQC Report
Fri 9 Sep 2022
EGAF00001857768

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00001857768
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences1507098
Sequences flagged as poor quality0
Sequence length151
%GC47

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT27980.18565481474993664No Hit
GTACTAGGCATCGTCATCCAATGCGACGAGTCCTACACTATCTTGGATAT16620.11027816372923328No Hit
TATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT15670.10397465858225544No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)