FastQCFastQC Report
Sun 4 Sep 2022
EGAF00001858207

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00001858207
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences1095987
Sequences flagged as poor quality0
Sequence length151
%GC44

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT90200.8230024626204507No Hit
TATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT76150.6948075114029637No Hit
GGTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT52940.4830349265091648No Hit
GTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT17620.16076833028128984No Hit
ACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT16490.1504579890089937No Hit
GAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT13040.11897951344313391No Hit
ATTATAACCCTACATTTTGTGCATAAAGTGTAAGTGTATAAGCATATCAA11330.10337713859744688No Hit
ACACTGAATTCACCCCCACTGAAAAAGATGAGTATGCCTGCCGTGTGAAC11180.1020085092250182No Hit
GATTAAGAGGGACGGCCGGGGGCATTCGTATTGCGCCGCTAGAGGTGAAA11020.10054863789442758No Hit
CTTATACACTTACACTTTATGCACAAAATGTAGGGTTATAATAATGTTAA10970.10009242810361803No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)