FastQCFastQC Report
Sun 4 Sep 2022
EGAF00001858279

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00001858279
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences740286
Sequences flagged as poor quality0
Sequence length151
%GC46

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT43640.5895018952134716No Hit
TATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT30690.4145695042186398No Hit
GGTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT22950.3100153184039682No Hit
ACACTGAATTCACCCCCACTGAAAAAGATGAGTATGCCTGCCGTGTGAAC8570.11576606878962996No Hit
ATTATAACCCTACATTTTGTGCATAAAGTGTAAGTGTATAAGCATATCAA7890.10658042972580867No Hit
ACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT7800.10536468337912644No Hit
GTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT7530.10171744433907977No Hit

[WARN]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)