FastQCFastQC Report
Sun 11 Sep 2022
EGAF00001862003

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00001862003
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences2407504
Sequences flagged as poor quality0
Sequence length151
%GC48

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT92610.38467225807309147No Hit
TATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT48640.20203497065840806No Hit
GGTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT34870.1448388040061408No Hit

[FAIL]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)