FastQCFastQC Report
Fri 9 Sep 2022
EGAF00001862668

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00001862668
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences1481889
Sequences flagged as poor quality0
Sequence length101
%GC50

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[WARN]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
GAATAACGCCGCCGCATCGCCGGTCGGCATCGTTTATGGTCGGAACTACG16330.11019718750864606No Hit
CTCTTAATCATGGCCTCAGTTCCGAAAACCAACAAAATAGAACCGCGGTC16030.10817274438233904No Hit
GTCCTATTCCATTATTCCTAGCTGCGGTATCCAGGCGGCTCGGGCCTGCT15880.10716052281918552No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)