FastQCFastQC Report
Sun 4 Sep 2022
EGAF00001863537

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00001863537
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences826521
Sequences flagged as poor quality0
Sequence length151
%GC44

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT93901.1360872863484412No Hit
TATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT58000.7017365559979722No Hit
GGTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT41600.5033144953364767No Hit
GTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT15640.1892268919966946No Hit
ACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT13460.16285127661608115No Hit
CTTATACACTTACACTTTATGCACAAAATGTAGGGTTATAATAATGTTAA12070.1460337970844056No Hit
GAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT10800.1306681862892776No Hit
ATTATAACCCTACATTTTGTGCATAAAGTGTAAGTGTATAAGCATATCAA9550.1155445536169075No Hit
ACACTGAATTCACCCCCACTGAAAAAGATGAGTATGCCTGCCGTGTGAAC9020.10913213336382258No Hit
AACCACAACCATGCCTTACTTTATCAAATGTATAAGAAGTAAATATGAAT8480.1025987240493587No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)