FastQCFastQC Report
Sun 4 Sep 2022
EGAF00001868243

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00001868243
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences1435936
Sequences flagged as poor quality0
Sequence length151
%GC46

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT82370.5736328081474383No Hit
TATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT48140.33525171038263546No Hit
GGTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT38100.2653321596505694No Hit

[FAIL]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)