FastQCFastQC Report
Mon 5 Sep 2022
EGAF00001873605

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00001873605
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences44131136
Sequences flagged as poor quality0
Sequence length51
%GC50

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
CTCAGACCGCGTTCTCTCCCTCTCACTCCCCAATACGGAGAGAAGAACGAT6104761.3833226500219709No Hit
CCGCGTTCTCTCCCTCTCACTCCCCAATACGGAGAGAAGAACGATCATCAA587840.13320300660286652No Hit
CAGACCGCGTTCTCTCCCTCTCACTCCCCAATACGGAGAGAAGAACGATCA574990.1302912302098908No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)