FastQCFastQC Report
Sat 1 Apr 2023
EGAF00001878257

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00001878257
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences28129609
Sequences flagged as poor quality0
Sequence length50
%GC43

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
ACTTCCAGGGATTTATAAGCCGATGACGTCATAACATCCCTGACCCTTTA379460.13489700478950845No Hit
TATTCGTTGGAATTCCTCGGGGAATTCGGTATTCCCAGGCGGTCTCCCAT304710.10832358174619491No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)