FastQCFastQC Report
Tue 27 Sep 2022
EGAF00001878275

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00001878275
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences28200970
Sequences flagged as poor quality0
Sequence length50
%GC44

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[WARN]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
ACTTCCAGGGATTTATAAGCCGATGACGTCATAACATCCCTGACCCTTTA1013610.35942380705344534No Hit
TATTCGTTGGAATTCCTCGGGGAATTCGGTATTCCCAGGCGGTCTCCCAT817440.28986236998230913No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)