FastQCFastQC Report
Fri 23 Dec 2022
EGAF00001878789

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00001878789
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences242224695
Sequences flagged as poor quality0
Sequence length101
%GC46

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
CACGCCTTTGGCACAATGAAGTGGGTAACCTTTATTTCCCTTCTTTTTCT4162930.1718623280751783No Hit
CCCCACACGCCTTTGGCACAATGAAGTGGGTAACCTTTATTTCCCTTCTT2835910.117077657998496No Hit
CCCACACGCCTTTGGCACAATGAAGTGGGTAACCTTTATTTCCCTTCTTT2835380.11705577748792294No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)