FastQCFastQC Report
Sun 11 Sep 2022
EGAF00001879095

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00001879095
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences3231362
Sequences flagged as poor quality0
Sequence length126
%GC51

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
GTATGAATGGCTCCACGAGGGTTCAGCTGTCTCTTACTTTTAACCAGTGA42480.13146159421321413No Hit
CCTCACCCGGCCCGGACACGGACAGGATTGACAGATTGATAGCTCTTTCT36680.11351250649107095No Hit
CGAGGGTTCAGCTGTCTCTTACTTTTAACCAGTGAAATTGACCTGCCCGT34190.10580677745173706No Hit

[FAIL]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)