FastQCFastQC Report
Mon 12 Sep 2022
EGAF00001880146

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00001880146
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences1506724
Sequences flagged as poor quality0
Sequence length250
%GC54

[WARN]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
AAGACCGATGGGCCCTTGGTGGAGGCTGAGGAGACGGTGACCAGGGTTCC1008396.692599308167919No Hit
AAGACCGATGGGCCCTTGGTGGAGGCTGAGGAGACGGTGACCGTGGTCCC661934.393173534104455No Hit
AAGACGGATGGGCCCTTGGTGGAGGCTGAGGAGACGGTGACCAGGGTTCC528793.5095345929314194No Hit
AAGACGGATGGGCCCTTGGTGGAGGCTGAGGAGACGGTGACCGTGGTCCC346172.2975010685434096No Hit
AGCGACCTCGGGTGGGAACACGTTTTTCAGGTCCTCGAGCACTGTCAGCC281011.8650396489337133No Hit
AAGACGGATGGGCCCTTGGTGGAAGCTGAGGAGACGGTGACCAGGGTTCC234741.557949564751076No Hit
AGCGACCTCGGGTGGGAACACGTTTTTCAGGTCCTCTGTGACCGTGAGCC204131.3547935786514318No Hit
AAGACGGATGGGCCCTTGGTGGAAGCTGAGGAGACGGTGACCGTGGTCCC156791.0406019947913485No Hit
AAGACCGATGGGCCCTTGGTGGAGGCTGAAGAGACGGTGACCATTGTCCC153011.015514453874764No Hit
AAGACCGATGGGCCCTTGGTGGAGGCTGAGGAGACAGTGACCAGGGTGCC148130.9831263058131416No Hit
AAGACCGATGGGCCCTTGGTGGAGGCTGAGGAGACGATGACCGTGGTCCC134110.8900767492918411No Hit
AGCGACCTCGGGTGGGAACACCTTGTTCAGGTCCTCTAGGATGGAGAGTC125520.8330656444046819No Hit
AGCGACCTCGGGTGGGAACACGTTTTTCAGGTCCTCCAGTACGGTCAGCC117770.7816295486100971No Hit
AGCGACCTCGGGTGGGAACACGTTTTTCAGGTCCTCTAGCACGGTGAGCC117280.7783774599727621No Hit
AAGACCGATGGGCCCTTGGTGGAGGCTGAGGAGACGGTTATCAGGGTTCC104930.6964115524807463No Hit
AAGACCGATGGGCCCTTGGTGGAGGCTGGGGAGACAGTGACCAGGGTGCC99920.6631606053928921No Hit
AGCGACCTCGGGTGGGAACACCTTGTTCAGGTCCTCTACAACGGTTAACC92200.6119236170658993No Hit
AGCGACCTCGGGTGGGAACACCTTGTTCAGGTCCTCTACAACTGTGAGTC86080.5713056936771432No Hit
AAGACGGATGGGCCCTTGGTGGAAGCCGAGGAGACGGTGACCACGATTCC81930.5437624939935914No Hit
AAGACGGATGGGCCCTTGGTGGAGGCTGAAGAGACGGTGACCATTGTCCC80520.5344044430167701No Hit
AAGACGGATGGGCCCTTGGTGGAAGCTGAAGAGACGGTGACCATTGTCCC77810.5164184017776314No Hit
AAGACGGATGGGCCCTTGGTGGAGGCTGAGGAGACAGTGACCAGGGTGCC76150.5054011219042107No Hit
AAGACGGATGGGCCCTTGGTGGAGGCTGAGGAGACGATGACCGTGGTCCC69200.45927455857874433No Hit
AAGACCGATGGGCCCTTGGTGGAGGCTGAAGAGACGGTGACCAGGGTTCC69000.45794717546146474No Hit
AAGACCGATGGGCCCTTGGTGGAGGCTGAGGAGACGGTGACCGTAGTCCC66700.44268226961274926No Hit
AAGACCGATGGGCCCTTGGTGGAGGCTGAGGAGACGGTGACCAAAGTTCC64490.42801468616680954No Hit
AAGACCGATGGGCCCTTGGTGGAGGCTGAGGAGACGCTGACCAAGGTTCC62040.4117542429801344No Hit
AAGACCGATGGGCCCTTGGTGGAAGCTGAGGAGACGGTGACCAGGGTTCC61070.4053164348613283No Hit
AAGACGGATGGGCCCTTGGTGGAGGCTGAGGAGACGGTTATCAGGGTTCC55450.3680169692657713No Hit
AAGACCGATGGGCCCTTGGTGGAAGCTGAGGAGACGATGGCCAGGGTTCC54060.358791656600678No Hit
AAGACGGATGGGCCCTTGGTGGAGGCTGGGGAGACAGTGACCAGGGTGCC53240.3533493858198316No Hit
AAGACCGATGGGCCCTTGGTGGAGGCTGAAGAGACGGTGACCACTGTGCC50790.3370889426331564No Hit
AAGACCGATGGGCCCTTGGTGGAGGCTGAGGAGACGATGACCAGCGTTCC49900.3311820877612622No Hit
AGCGACCTCGGGTGGGAACACGTTTTTCAGGTCCTCGAGCACCAGGAGCC49080.3257398169804158No Hit
AAGACCGATGGGCCCTTGGTGGAGGCTGAAGAGACGGTGACCATCGTCCC47980.31843920983537793No Hit
AAGACCGATGGGCCCTTGGTGGAGGCTGAAGAGACGGTGATCCATGTCCC47280.31379336892489934No Hit
AAGACCGATGGGCCCTTGGTGGAGGCTGAGGAGACGGTGACCGTGGACCC43020.2855201085268437No Hit
AAGACCGATGGGCCCTTGGTGGAGGCTGAGGAGACGGTGACCAGGGCTCC42610.2827989731364205No Hit
AAGACCGATGGGCCCTTGGTGGAGGCTGAGGAGACGGTGACCGGGGTTCC41600.27609568839415843No Hit
AAGACCGATGGGCCCTTGGTGGAAGCCGAGGAGACAGTGACCAGGGTGCC39920.2649456702090098No Hit
AAGACGGATGGGCCCTTGGTGGAGGCTGAGGAGACGGTGACCGTAGTCCC36850.24457033935876776No Hit
AAGACCGATGGGCCCTTGGTGGAAGCTGAGGAGACGGTGACCGTGGTCCC36520.2423801572152564No Hit
AAGACGGATGGGCCCTTGGTGGAGGCTGAAGAGACGGTGACCAGGGTTCC35320.23441585851157876No Hit
AAGACCGATGGGCCCTTGGTGGAGGCTGAAGAGACGATGACCGGTATTCC33110.2197482750656391No Hit
AAGACGGATGGGCCCTTGGTGGAGGCTGAGGAGACGGTGACCAAAGTTCC32680.21689440136348795No Hit
AAGACGGATGGGCCCTTGGTGGAGGCTGAGGAGACGCTGACCAAGGTTCC32400.21503606499929648No Hit
AGCGACCTCGGGTGGGAACACCTTGTTCAGGTCCTCTGTCACAGTGAGCC31600.20972653253017803No Hit
AAGACCGATGGGCCCTTGGTGGAAGCTGAGGAGACGGAGACCTGGGTGCC30230.20063395817681273No Hit
AAGACGGATGGGCCCTTGGTGGAAGCTGAGGAGACGATGGCCAGGGTTCC29040.19273602862899908No Hit
AAGACGGATGGGCCCTTGGTGGAGGCTGAGGAGACGATGACCAGCGTTCC27280.1810550571969385No Hit
AAGACCGATGGGCCCTTGGTGGAGGCTGAGGAGACGGTGACCATTGTCCC27220.18065684226175463No Hit
AAGACCGATGGGCCCTTGGTGGAGGCTGAGGAGACGGCGACCAGGGTTCC25910.1719624828435732No Hit
AAGACGGATGGGCCCTTGGTGGAGGCTGAAGAGACGGTGACCACTGTGCC25710.1706350997262936No Hit
AAGACCGATGGGCCCTTGGTGGAGGCTGAGGAGACGGTGACCAGGGTGCC25550.16957319323246992No Hit
AAGACGGATGGGCCCTTGGTGGAGGCTGAAGAGACGGTGACCATCGTCCC25400.1685776558945102No Hit
AAGACGGATGGGCCCTTGGTGGAGGCTGAAGAGACGGTGATCCATGTCCC24070.15975055816460082No Hit
AAGACCGATGGGCCCTTGGTGGAGGCTGAGGAGACGATGACCAGGGTTCC24010.15935234322941694No Hit
AGCGACCTCGGGTGGGAACACGTTTTTCAGGTCCTCTGGAAAGGGAAGAG22840.15158715199333123No Hit
AAGACCGATGGGCCCTTGGTGGAGGCTGAGGAGACGGTGGCCGTGGTCCC22830.15152078283746725No Hit
AAGACCGATGGGCCCTTGGTGGAGGCCGAGGAGACGGTGACCGTGGCCCC22220.14747226432976446No Hit
AAGACGGATGGGCCCTTGGTGGAGGCTGAGGAGACGGTGACCGTGGACCC22040.14627761952421278No Hit
AAGACGGATGGGCCCTTGGTGGAAGCTGAGGAGACGGTGACCAGGATTCC21770.14448565231588534No Hit
AAGACGGATGGGCCCTTGGTGGAGGCTGAGGAGACGGTGACCAGGGCTCC21630.1435564841337896No Hit
AAGACGGATGGGCCCTTGGTGGAAGCTGAGGAGACGGTGACCTGGGAACC21600.14335737666619766No Hit
AAGACGGATGGGCCCTTGGTGGAGGCTGAGGAGACGGTGACCGGGGTTCC20560.13645498445634371No Hit
AAGACGGATGGGCCCTTGGTGGAAGCCGAGGAGACAGTGACCAGGGTGCC20230.13426480231283233No Hit
AAGACCGATGCGCCCTTGGTGGAGGCTGAGGAGACGGTGACCAGGGTTCC20100.1334020032866006No Hit
AAGACCGATGGGCCCTTGGTGGAGGCTGAGGAGACGGTGAGCGTGGTCCC19890.13200825101345703No Hit
AGCGACCTCGGGTGGGAACACGTTTTTCAGGTCCTCTGGAGCACTGTGCC19760.13114545198722524No Hit
AGCGACCTCGGGTGGGAACACCTTGTTCAGGTCCTCTACAACAGTGAGCC19460.12915437731130586No Hit
AAGACCGATGGGCCCTTGGTGGAAGCCGAGGAGACGGTGACCACGATTCC19410.12882253153198595No Hit
AAGACCGATGGGCCCTTGGTGGAGGCCGAGGAGACGGTGACCAGATTTCC18580.12331389159527559No Hit
AAGACCGATGGGCCCTTGGTGGAGGCTGAGGAGACGGTGACCGAGGTCCC18530.12298204581595568No Hit
AAGACGGATGGGCCCTTGGTGGAGGCTGAAGAGACGATGACCGGTATTCC18070.11992906464621259No Hit
AAGACCGATGGGCCCTTGGTGGAAGCTGAAGAGACGGTGACCATTGTCCC17820.11826983574961306No Hit
AAGACCGATAGGCCCTTGGTGGAGGCTGAGGAGACGGTGACCAGGGTTCC17340.11508411626814201No Hit
AAGACCGATGGGCCCTTGGTGGAGGCTGAGGAGACGGTGACCAGGATTCC17280.11468590133295813No Hit
AAGACGGATGGGCCCTTGGTGGAAGCTGAGGAGACGGAGACCTGGGTGCC15760.10459778964163312No Hit
AAGACCGATGGGCCCTTGGTGGAGGCTGAAGAGACGGCGACTAGGGCTCC15640.10380135977126534No Hit
AAGACCGATGGGCCCTTGGTGGAGGCTGAGGAGACGCTGACCGTGGTCCC15490.10280582243330563No Hit

[WARN]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)