FastQCFastQC Report
Tue 13 Sep 2022
EGAF00001880170

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00001880170
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences2665412
Sequences flagged as poor quality0
Sequence length250
%GC54

[WARN]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
AAGACCGATGGGCCCTTGGTGGAGGCTGAGGAGACGGTGACCAGGGTTCC1875887.0378613137481185No Hit
AAGACGGATGGGCCCTTGGTGGAGGCTGAGGAGACGGTGACCAGGGTTCC951173.5685665105432105No Hit
AAGACCGATGGGCCCTTGGTGGAGGCTGAGGAGACGGTGACCGTGGTCCC812333.0476714294075364No Hit
AAGACCGATGGGCCCTTGGTGGAGGCTGAAGAGACGGTGACCATTGTCCC457311.7157197461405589No Hit
AAGACCGATGGGCCCTTGGTGGAGGCCGAGGAGACGGTGACCAGGGTTCC452771.6986867321074566No Hit
AAGACGGATGGGCCCTTGGTGGAGGCTGAGGAGACGGTGACCGTGGTCCC415711.5596463135905443No Hit
AAGACCGATGGGCCCTTGGTGGAGGCTGAGGAGACGGTGACCAGGGTGCC266741.0007458509228593No Hit
AAGACGGATGGGCCCTTGGTGGAGGCCGAGGAGACGGTGACCAGGGTTCC238620.8952462133433781No Hit
AAGACGGATGGGCCCTTGGTGGAGGCTGAAGAGACGGTGACCATTGTCCC236980.8890933184063101No Hit
AAGACCGATGGGCCCTTGGTGGAGGCTGATGAGACGGTGACTACGGTTCC232050.8705971159430512No Hit
AAGACCGATGGGCCCTTGGTGGAGGCTGAGGAGACGGTGACCAGGGTCCC165310.6202043061260323No Hit
AAGACCGATGGGCCCTTGGTGGAGGCGGAGGAGACGGTGACCAGGGTTCC161890.6073732691231224No Hit
AAGACCGATGGGCCCTTGGTGGAGGCTGAAGAGACGGTGACCAGGGTCCC146750.5505715439114103No Hit
AAGACGGATGGGCCCTTGGTGGAGGCTGAGGAGACGGTGACCAGGGTGCC135250.5074262440478245No Hit
AAGACCGATGGGCCCTTGGTGGAGGCTGAAGAGACGGTGACCACTGTCCC134740.5055128437930047No Hit
AAGACCGATGGGCCCTTGGTGGAGGCTGAGGAGACGGCGACCAGGGTTCC124110.46563157965822916No Hit
AAGACCGATGGGCCCTTGGTGGAGGCTGAGGAGACGGTGACCGCGGTCCC121170.4546013899539733No Hit
AAGACCGATGGGCCCTTGGTGGAGGCTGAGGAGACGGTGATCAGGGTTCC120610.452500401438877No Hit
AAGACCGATGGGCCCTTGGTGGAGGCTGAAGAGACGATGACCGTAGTCCC118800.44570970641686913No Hit
AAGACGGATGGGCCCTTGGTGGAGGCTGATGAGACGGTGACTACGGTTCC117780.4418829059072294No Hit
AAGACCGATGGGCCCTTGGTGGAGGCTGAGGAGACGGTGACCAGGGCTCC116610.4374933406167602No Hit
AAGACCGATGGGCCCTTGGTGGAGGCTGAGGAGACGCTGACCAGGGTTCC116300.4363302934030461No Hit
AAGACCGATGGGCCCTTGGTGGAGGCTGAGGAGACGATGACCAGGGTTCC115680.434004198975618No Hit
AAGACCGATGGGCCCTTGGTGGAGGCTGAGGAGACGATGACCGTGGTCCC109810.4119813372191616No Hit
AAGACCGATGGGCCCTTGGTGGAAGCTGAGGAGACGGTGACCAGGGTTCC105140.3944605937093402No Hit
AAGACCGATGGGCCCTTGGTGGAGGCTGAGGAGACGGTGACCACGGTTCC91830.3445245988237466No Hit
AAGACCGATGGGCCCTTGGTGGAGGCTGAGGAGACGGTGACCAGAGTTCC89980.33758383319351754No Hit
AAGACCGATGGGCCCTTGGTGGAGGCTGAGGAGACGGGGACCAGGGTTCC89190.3346199386811495No Hit
AAGACGGATGGGCCCTTGGTGGAGGCGGAGGAGACGGTGACCAGGGTTCC87500.3282794554838051No Hit
AAGACGGATGGGCCCTTGGTGGAGGCTGAGGAGACGGTGACCAGGGTCCC82420.30922048823971676No Hit
AAGACCGATGGGCCCTTGGTGGAGGCTGAGGAGACGGGGACCAGGGATCC81420.3054687230341876No Hit
AAGACCGATGGGCCCTTGGTGGAGGCTGAAGAGACGGTGACCAGGGTTCC80630.30250482852181954No Hit
AAGACCGATGGGCCCTTGGTGGAGGCCGAGGCGACGGTGACCGTGGTCCC75240.2822828140640171No Hit
AAGACGGATGGGCCCTTGGTGGAGGCTGAAGAGACGGTGACCAGGGTCCC74650.2800692725927549No Hit
AAGACGGATGGGCCCTTGGTGGAGGCTGAAGAGACGGTGACCACTGTCCC69100.25924697570206784No Hit
AAGACCGATGGGCCCTTGGTGGAAGCTGAGGAGACGGTGACCGTGGTCCC65800.24686615052382146No Hit
AAGACGGATGGGCCCTTGGTGGAGGCTGAGGAGACGGCGACCAGGGTTCC65480.24566558565805213No Hit
AAGACGGATGGGCCCTTGGTGGAGGCTGAGGAGACGGTGACCGCGGTCCC62200.23335979578391633No Hit
AAGACGGATGGGCCCTTGGTGGAGGCTGAAGAGACGATGACCGTAGTCCC61980.2325344074386999No Hit
AAGACGGATGGGCCCTTGGTGGAGGCTGAGGAGACGGTGATCAGGGTTCC61410.23039590127154827No Hit
AAGACCGATGGGCCCTTGGTGGAGGCTGAGGGGACGGTGACCAGGGTTCC60990.228820159885226No Hit
AAGACGGATGGGCCCTTGGTGGAGGCTGAGGAGACGGTGACCAGGGCTCC60970.22874512458111543No Hit
AAGACCGATGGGCCCTTGGTGGAGGCTGAGGAGACGCTGACGAGGGTTCC59520.22330506503309808No Hit
AAGACGGATGGGCCCTTGGTGGAGGCTGAGGAGACGATGACCAGGGTTCC59290.22244215903582634No Hit
AAGACGGATGGGCCCTTGGTGGAGGCTGAGGAGACGCTGACCAGGGTTCC59060.22157925303855466No Hit
AAGACGGATGGGCCCTTGGTGGAGGCTGAGGAGACGATGACCGTGGTCCC57130.21433834619188327No Hit
AAGACCGATGGGCCCTTGGTGGAAGGTGAGGAGACGGTGACCAGGGTTCC56460.21182466350417872No Hit
AAGACCGATGGGCCCTTGGTGGAGGCTGAGGAGACAATGACCGTGGTCCC53870.2021075916218581No Hit
AAGACGGATGGGCCCTTGGTGGAAGCTGAGGAGACGGTGACCAGGGTTCC53400.20034426197525937No Hit
AAGACCGATGGGCCCTTGGTGGAGGCTGAGGAGACGGTGACTAGGGTTCC50280.18863875453400825No Hit
AAGACGGATGGGCCCTTGGTGGAGGCTGAGGAGACGGTGACCACGGTTCC48270.18109770647089454No Hit
AAGACCGATGGGCCCTTGGTGGAGGCTGAAGAGACGATGACCGTGGTCCC47320.1775335295256418No Hit
AAGACGGATGGGCCCTTGGTGGAGGCTGAGGAGACGGTGACCAGAGTTCC47200.1770833177009783No Hit
AAGACCGATGGGCCCTTGGTGGAGGCTGAGGAGACGGTGACCGGGGTCCC46880.17588275283520896No Hit
AAGACGGATGGGCCCTTGGTGGAGGCTGAGGAGACGGGGACCAGGGTTCC46770.17547005866260076No Hit
AAGACCGATGGGCCCTTGGTGGAGGCTGAGGAGACGACGACCAGGGTTCC46300.17370672901600204No Hit
AAGACCGATGGGCCCTTGGTGGAGGCTGAGGAGACGGCGACCAATGTCCC44260.16605312799672245No Hit
AAGACCGATGGGCCCTTGGTGGAGGCTGAGGAGACGGTGACCTGGGTTCC43970.164965116087119No Hit
AAGACCGATGGGCCCTTGGTGGAGGCTGACGAGACGATGACCGTGGTCCC43810.16436483365423432No Hit
AAGACGGATGGGCCCTTGGTGGAGGCTGAGGAGACGGGGACCAGGGATCC42490.15941250358293577No Hit
AAGACGGATGGGCCCTTGGTGGAGGCTGAAGAGACGGTGACCAGGGTTCC41030.15393492638286316No Hit
AAGACCGATGGGCCCTTGGTGGAGGCTGAGGAGACTATGACCGTGGTCCC39550.14838231387867992No Hit
AAGACGGATGGGCCCTTGGTGGAGGCCGAGGCGACGGTGACCGTGGTCCC39320.1475194078814082No Hit
AAGACCGATGGGCCCTTGGTGGAGGCAGAGGAGACGGCGACCAGGGTTCC38870.14583111353892006No Hit
AAGACCGATGGGCCCTTGGTGGAGGCTGAAGCGACGGTGACCATTGTCCC36930.1385526890401934No Hit
AAGACCGATGGGCCCTTGGTGGAGGCTGAGGAGACGGTCACCAGGGTTCC36210.13585141809221238No Hit
AAGACCGATGGGCCCTTGGTGGAGGCTGAGGAGACGGTGACCAGGGATCC36040.1352136180072724No Hit
AAGACCGATGGGCCCTTGGTGGAGGCTGAGGAGACTGTGACCAGAGTTCC35380.13273745297162315No Hit
AAGACGGATGGGCCCTTGGTGGAAGCTGAGGAGACGGTGACCGTGGTCCC32860.12328300465368955No Hit
AAGACCGATGGGCCCTTGGTGGAAGCTGAAGAGACGGTGACCTGGGTTCC32620.12238258100436256No Hit
AAGACCGATGGGCCCTTGGTGGAGGGTGAGGAGACGATGACCAGGACTCC32440.1217072632673673No Hit
AAGACCGATGGGCCCTTGGTGGAGGCTGAGGAGACAGTGACCAGGGTTCC31430.11791798040978281No Hit
AAGACCGATGGGCCCTTGGTGGAGGCTGAAGAGACGGTGACCGTGGTCCC30820.11562940363440997No Hit
AAGACGGATGGGCCCTTGGTGGAGGCTGAGGAGACGCTGACGAGGGTTCC29450.11048948530283499No Hit
AAGACGGATGGGCCCTTGGTGGAGGCTGAGGGGACGGTGACCAGGGTTCC29170.10943899104528682No Hit
AAGACGGATGGGCCCTTGGTGGAGGCTGAGGAGACAATGACCGTGGTCCC28470.10681275540141637No Hit
AAGACCGATGGGCCCTTGGTGGAGGCAGAGGAGACGGTGACCGGGGTTCC27970.10493687279865176No Hit
AAGACGGATGGGCCCTTGGTGGAAGGTGAGGAGACGGTGACCAGGGTTCC27140.10182290767806253No Hit
AAGACCGATGGGCCCTTGGTGGAGGCTGAGGAGACGATGACCGCGGTCCC27010.10133517820134373No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)