FastQCFastQC Report
Tue 13 Sep 2022
EGAF00001880174

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00001880174
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences3016767
Sequences flagged as poor quality0
Sequence length250
%GC53

[WARN]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
AAGACCGATGGGCCCTTGGTGGAGGCTGAGGAGACGGTGACCAGGGTTCC1907236.322099121344141No Hit
AAGACGGATGGGCCCTTGGTGGAGGCTGAGGAGACGGTGACCAGGGTTCC1016603.3698326718636205No Hit
AAGACCGATGGGCCCTTGGTGGAGGCTGAGGAGACGGTGACCAGGGTCCC971643.220798954642503No Hit
AAGACCGATGGGCCCTTGGTGGAGGCTGAGGAGACGGTGACCGTGGTCCC689322.2849626769319604No Hit
AAGACCGATGGGCCCTTGGTGGAGGCTGAAGAGACGGTGACCACTGTCCC597631.9810280343162068No Hit
AAGACCGATGGGCCCTTGGTGGAGGCTGAGGAGACGGTGACCATTGTCCC562011.86295461333275No Hit
AAGACGGATGGGCCCTTGGTGGAGGCTGAGGAGACGGTGACCAGGGTCCC513981.7037444389971117No Hit
AAGACCGATGGGCCCTTGGTGGAGGCCGAGGAGACGGTGACCAGAGTTCC500341.658530473185367No Hit
AAGACCGATGGGCCCTTGGTGGAGGCTGAGGACACGATGACCGTGGTCCC483451.602543385021117No Hit
AAGACCGATGGGCCCTTGGTGGAGGCTGAGGAGACGGTGACCAGGATTCC458341.519308584322223No Hit
AAGACCGATGGGCCCTTGGTGGAGGCTGAGGAGACGATGACCGTGGTCCC409051.3559217533206906No Hit
AAGACCGATGGGCCCTTGGTGGAGGCTGAAGAGACGGTGACCGTTGTCCC404181.3397786438263215No Hit
AAGACCGATGGGCCCTTGGTGGAGGCTGAGGAGACGGTTATCGTGGTCCC381471.2644993796338928No Hit
AAGACCGATGGGCCCTTGGTGGAGGCTGAGGAGACGGGGACCAGGGTTCC369461.224688549032789No Hit
AAGACGGATGGGCCCTTGGTGGAGGCTGAGGAGACGGTGACCGTGGTCCC357661.185573827876001No Hit
AAGACGGATGGGCCCTTGGTGGAGGCTGAAGAGACGGTGACCACTGTCCC332051.1006816237382602No Hit
AAGACGGATGGGCCCTTGGTGGAGGCTGAGGAGACGGTGACCATTGTCCC291660.9667965739482035No Hit
AAGACCGATGGGCCCTTGGTGGAGGCTGAAGAGACGATGACCATAGCCCC274650.9104117089586302No Hit
AAGACGGATGGGCCCTTGGTGGAGGCCGAGGAGACGGTGACCAGAGTTCC272720.9040141316846809No Hit
AAGACGGATGGGCCCTTGGTGGAGGCTGAGGACACGATGACCGTGGTCCC264470.8766669749437063No Hit
AAGACGGATGGGCCCTTGGTGGAGGCTGAGGAGACGGTGACCAGGATTCC249920.8284365348732601No Hit
AAGACCGATGGGCCCTTGGTGGAGGCCGAGGAGACGGTGACCAGGGTTCC240520.7972773502229373No Hit
AAGACGGATGGGCCCTTGGTGGAGGCTGAGGAGACGATGACCGTGGTCCC224330.7436106268730731No Hit
AAGACGGATGGGCCCTTGGTGGAGGCTGAAGAGACGGTGACCGTTGTCCC218060.7228267877499324No Hit
AAGACGGATGGGCCCTTGGTGGAGGCTGAGGAGACGGGGACCAGGGTTCC212110.7031036868276536No Hit
AAGACGGATGGGCCCTTGGTGGAGGCTGAGGAGACGGTTATCGTGGTCCC198580.658254349772455No Hit
AAGACCGATGGGCCCTTGGTGGAGGCTGAGGAGACGGTGACCCGGGTTCC180730.5990850470056189No Hit
AAGACCGATGGGCCCTTGGTGGAGGCTGAGGAGACTGTGAGCAGGGAGCC179570.595239871027494No Hit
AAGACGGATGGGCCCTTGGTGGAGGCTGAAGAGACGATGACCATAGCCCC150630.4993093599870325No Hit
AAGACGGATGGGCCCTTGGTGGAGGCCGAGGAGACGGTGACCAGGGTTCC131430.43566506793530957No Hit
AAGACGGATGGGCCCTTGGTGGAGGCTGAGGAGACGGTGACCCGGGTTCC98550.32667421779673406No Hit
AAGACGGATGGGCCCTTGGTGGAGGCTGAGGAGACTGTGAGCAGGGAGCC94030.3116912907095576No Hit
AAGACCGATGGGCCCTTGGTGGAGGCTGAGGACACGCTGACCGTGGTCCC49030.16252498121333203No Hit
AAGACCGATGGGCCCTTGGTGGAGGCTGAGGAGACGGTGACCAGGCTTCC41200.13657004336098877No Hit
AAGACCGATGGGCCCTTGGTGGAGGCTGAGGAGACGCTGACCGTGGTCCC41190.13653689529221183No Hit
AAGACCGATGGGCCCTTGGTGGAGGCTGAGGAGACGGTGACCGGGGTCCC30390.10073698101311769No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)