FastQCFastQC Report
Mon 5 Sep 2022
EGAF00001880176

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00001880176
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences4264018
Sequences flagged as poor quality0
Sequence length250
%GC54

[WARN]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
AAGACCGATGGGCCCTTGGTGGAGGCTGAGGAGACGGTGACCAGGGTTCC54931612.882591020957229No Hit
AAGACGGATGGGCCCTTGGTGGAGGCTGAGGAGACGGTGACCAGGGTTCC2856956.700135881227519No Hit
AAGACCGATGGGCCCTTGGTGGAGGCTGAGGAGACGGTGACCGTGGTCCC1491363.4975462111088653No Hit
AAGACGGATGGGCCCTTGGTGGAGGCTGAGGAGACGGTGACCGTGGTCCC783861.8383130652825577No Hit
AAGACCGATGGGCCCTTGGTGGAGGCTGAGGAGACGGCGACCGTGGTCCC522881.2262612399853847No Hit
AAGACCGATGGGCCCTTGGTGGAGGCTGAGGAAACGGTGACCGTGGTCCC407650.9560231687577303No Hit
AAGACCGATGGGCCCTTGGTGGAGGCTGAGGAGACGGTGACCAGGGCTCC395150.9267080955099158No Hit
AAGACCGATGGGCCCTTGGTGGAAGCTGAAGAGACGGTGACCATTGTCCC392140.9196490258718419No Hit
AAGACCGATGGGCCCTTGGTGGAAGCTGAGGAGACGGTGACCAGGGTTCC335040.7857377712758249No Hit
AAGACCGATGGGCCCTTGGTGGAGGCTGAAGAGACGGTGACCACTGTCCC276830.6492233381754018No Hit
AAGACGGATGGGCCCTTGGTGGAGGCTGAGGAGACGGCGACCGTGGTCCC274920.6447439949831356No Hit
AAGACCGATGGGCCCTTGGTGGAGGCTGAAGAGACGGTGACCGTCGTCCC239440.5615360910765386No Hit
AAGACCGATGGGCCCTTGGTGGAGGCTGAGGTGACACTGACCAGGGTTCC231200.5422115947915792No Hit
AAGACCGATGGGCCCTTGGTGGAGGCTGAGGTGACGGTGACCGTGGTCCC230710.5410624439202648No Hit
AAGACCGATGGGCCCTTGGTGGAGGCTGAAGAGACGGTGACCATTGTCCC225820.5295943872657198No Hit
AAGACGGATGGGCCCTTGGTGGAGGCTGAGGAAACGGTGACCGTGGTCCC217930.5110907130316992No Hit
AAGACCGATGGGCCCTTGGTGGAGGCTGAGGAGACCGCGACCGTGGTCCC212630.49866112197462575No Hit
AAGACGGATGGGCCCTTGGTGGAGGCTGAGGAGACGGTGACCAGGGCTCC205140.48109553008453526No Hit
AAGACGGATGGGCCCTTGGTGGAAGCTGAAGAGACGGTGACCATTGTCCC200830.47098769282868885No Hit
AAGACCGATGGGCCCTTGGTGGAGGCTGAGGAGACGACGACCAGGGTTCC191490.4490834700979217No Hit
AAGACCGATGGGCCCTTGGTGGAGGCTAAAGAGACGGTGACCAGGGTTCC183360.43001694645754307No Hit
AAGACCGATGGGCCCTTGGTGGAGGCTGAAGAGACGGTGACCAATGTCCC175150.4107628063483785No Hit
AAGACGGATGGGCCCTTGGTGGAAGCTGAGGAGACGGTGACCAGGGTTCC169050.39645705060344494No Hit
AAGACCGATGGGCCCTTGGTGGAGGCTGAGGAGACGGTGACCAGTGTTCC163150.3826203360304764No Hit
AAGACCGATGGGCCCTTGGTGGAGGCGGAAGAGACGGTGACCATTTTGCC157050.36831458028554287No Hit
AAGACCGATGGGCCCTTGGTGGAGGCTGAAGAGACGATGACCGTTGTTCC155490.3646560591442156No Hit
AAGACCGATGGGCCCTTGGTGGAGGCTGAAGAGACGGGGACCAGGGTTCC152950.3586992362602597No Hit
AAGACCGATGGGCCCTTGGTGGAGGCTGAGGAGACGGTGACTGTGGTCCC151450.35518142747052195No Hit
AAGACGGATGGGCCCTTGGTGGAGGCTGAAGAGACGGTGACCACTGTCCC147930.34692630284393733No Hit
AAGACCGATGGGCCCTTGGTGGAGGCTGAGGAGACGGTGACCAGGGATCC131770.3090277761491626No Hit
AAGACGGATGGGCCCTTGGTGGAGGCTGAAGAGACGGTGACCGTCGTCCC128650.30171073386650804No Hit
AAGACCGATGGGCCCTTGGTGGAGGCTGAGGAGACGGTGACCAGGATTCC125720.2948392806972203No Hit
AAGACGGATGGGCCCTTGGTGGAGGCTGAGGTGACACTGACCAGGGTTCC121290.2844500187381948No Hit
AAGACGGATGGGCCCTTGGTGGAGGCTGAGGTGACGGTGACCGTGGTCCC118700.2783759355612476No Hit
AAGACCGATGGGCCCTTGGTGGAGGCTGAAGCGACGGTGACCATTGTCCC117360.2752333597090819No Hit
AAGACGGATGGGCCCTTGGTGGAGGCTGAAGAGACGGTGACCATTGTCCC115830.2716451947435494No Hit
AAGACGGATGGGCCCTTGGTGGAGGCTGAGGAGACCGCGACCGTGGTCCC112970.26493790598444944No Hit
AAGACCGATGGGCCCTTGGTGGAAGCTGAGGAGACGGTGACCAGGATTCC105580.24760683468034142No Hit
AAGACGGATGGGCCCTTGGTGGAGGCTGAGGAGACGACGACCAGGGTTCC102980.24150929944479596No Hit
AAGACCGATGGGCCCTTGGTGGAGGCTGAGGAGACAGGGACCAGGGTTCC101650.2383901756512285No Hit
AAGACCGATGGGCCCTTGGTGGAAGTTTAGGGTCGATTTCTCGGACACTT101400.23780387418627222No Hit
AAGACGGATGGGCCCTTGGTGGAGGCTAAAGAGACGGTGACCAGGGTTCC93810.22000376171019917No Hit
AAGACCGATGGGCCCTTGGTGGAGGCTGATGAGACGATGACTGTTGTCCC92260.21636869262747016No Hit
AAGACGGATGGGCCCTTGGTGGAGGCTGAAGAGACGGTGACCAATGTCCC91960.2156651308695226No Hit
AAGACGGATGGGCCCTTGGTGGAGGCGGAAGAGACGGTGACCATTTTGCC87520.20525241685189882No Hit
AAGACGGATGGGCCCTTGGTGGAGGCTGAAGAGACGATGACCGTTGTTCC82110.19256485315024469No Hit
AAGACGGATGGGCCCTTGGTGGAGGCTGAGGAGACGGTGACCAGTGTTCC81510.19115772963434957No Hit
AAGACCGATGGGCCCTTGGTGGAGGCGGATGAGACGGTGACCATTGTCCC81310.19068868846238454No Hit
AAGACGGATGGGCCCTTGGTGGAGGCTGAAGAGACGGGGACCAGGGTTCC81240.19052452405219678No Hit
AAGACCGATGGGCCCTTGGTGGAGGCCGAGGAGACGGTGACTAGAGTTCC80040.18771027702040657No Hit
AAGACGGATGGGCCCTTGGTGGAGGCTGAGGAGACGGTGACTGTGGTCCC79000.1852712629261884No Hit
AAGACCGATAGGCCCTTGGTGGAGGCTGAGGAGACGGTGACCAGGGTTCC74720.17523378184613667No Hit
AAGACCGATGCGCCCTTGGTGGAGGCTGAGGAGACGGTGACCAGGGTTCC71530.16775257515329436No Hit
AAGACGGATGGGCCCTTGGTGGAGGCTGAGGAGACGGTGACCAGGGATCC69360.16266347843747375No Hit
AAGACCGATGAGCCCTTGGTGGAGGCTGAGGAGACGGTGACCAGGGTTCC67690.15874698465156573No Hit
AAGACGGATGGGCCCTTGGTGGAGGCTGAGGAGACGGTGACCAGGATTCC67540.15839520377259197No Hit
AAGACGGATGGGCCCTTGGTGGAGGCTGAAGCGACGGTGACCATTGTCCC64100.15032769561479337No Hit
AAGACGGATGGGCCCTTGGTGGAAGCTGAGGAGACGGTGACCAGGATTCC54870.12868144552860705No Hit
AAGACGGATGGGCCCTTGGTGGAGGCTGAGGAGACAGGGACCAGGGTTCC53700.1259375546726116No Hit
AAGACCGATGGGCCCTTGGTGGAGGCTGAAGAGACGGTGACCAGTGTCCC51460.12068429354660322No Hit
AAGAGCGATGGGCCCTTGGTGGAGGCTGAGGAGACGGTGACCAGGGTTCC51150.11995727973005742No Hit
AAGACGGATGGGCCCTTGGTGGAGGCTGATGAGACGATGACTGTTGTCCC47910.11235881274422388No Hit
AAGACGGATGGGCCCTTGGTGGAAGTTTAGGGTCGATTTCTCGGACACTT47140.1105530042321585No Hit
AAGACCGATGGGCCCTTGGTGGAGGCTGAGGAGACGGTGACCAGGGTCCC46020.10792637366915431No Hit
AAGACGGATGGGCCCTTGGTGGAGGCGGATGAGACGGTGACCATTGTCCC44200.10365809900427249No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)