FastQCFastQC Report
Mon 5 Sep 2022
EGAF00001880179

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00001880179
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences4624845
Sequences flagged as poor quality0
Sequence length250
%GC55

[WARN]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
AAGACCGATGGGCCCTTGGTGGAGGCTGAGGAGACGGTGACCGTGGTCCC46698010.097203257622688No Hit
AAGACGGATGGGCCCTTGGTGGAGGCTGAGGAGACGGTGACCGTGGTCCC2463925.327573140289026No Hit
AAGACCGATGGGCCCTTGGTGGAGGCTGAGGAGACGGTGACCAGGGTTCC2209904.778322300531153No Hit
AAGACCGATGGGCCCTTGGTGGAGGCTGCTGTCCTTGGTCCTGGCTGAGA1513313.272131282237567No Hit
AAGACCGATGGGCCCTTGGTGGAGGCTGAGGATACGGTGACCGTGGTCCC1262912.7307077318266884No Hit
AAGACGGATGGGCCCTTGGTGGAGGCTGAGGAGACGGTGACCAGGGTTCC1171002.5319767473288293No Hit
AAGACCGATGGGCCCTTGGTGGAGGCTGAGGAGACGGTGACCAGTGTTCC1123402.4290543791197328No Hit
AAGACGGATGGGCCCTTGGTGGAGGCTGCTGTCCTTGGTCCTGGCTGAGA807681.7463936629227577No Hit
AAGACCGATGGGCCCTTGGTGGAGGCTGAGTAGACGATGACCGTGGTCCC682521.4757683771023677No Hit
AAGACGGATGGGCCCTTGGTGGAGGCTGAGGATACGGTGACCGTGGTCCC671231.4513567481721008No Hit
AAGACCGATGGGCCCTTGGTGGAAGCTGCTGTCCTTGGTCCTGGCTGAGA601231.3000003243351939No Hit
AAGACGGATGGGCCCTTGGTGGAGGCTGAGGAGACGGTGACCAGTGTTCC594231.2848646819515033No Hit
AAGACGGATGGGCCCTTGGTGGAGGCTGAGTAGACGATGACCGTGGTCCC361590.7818424185026741No Hit
AAGACGGATGGGCCCTTGGTGGAAGCTGCTGTCCTTGGTCCTGGCTGAGA308170.6663358447688517No Hit
AAGACCGATGGGCCCTTGGTGGAAGCTGAAGAGACGGTGACCGTTGTCCC255040.5514563190766393No Hit
AAGACCGATGGGCCCTTGGTGGAGGCTGAGGAGACGGAGACCAGGGTTCC249850.5402343213664458No Hit
AAGACCGATGGGCCCTTGGTGGAAGCTGACGAGACGGTGACCAAGAATCC218580.4726212446038732No Hit
AAGACCGATGGGCCCTTGGTGGAGGCTGAAGAGACGGTGACCATTGTCCC203910.44090126263691004No Hit
AAGACCGATGGGCCCTTGGTGGAGGCTGAGGAGACGGTGACCAGGATTCC202620.4381119799690584No Hit
AAGACCGATGGGCCCTTGGTGGAGGCTGAGGAGACGATGACCGGGGTTCC185900.40195941701830007No Hit
AAGACCGATGGGCCCTTGGTGGAAGCTGAGGTGACGGTGACCGTGGTCCC149000.3221729593099877No Hit
AAGACGGATGGGCCCTTGGTGGAGGCTGAGGAGACGGAGACCAGGGTTCC131130.28353382653905157No Hit
AAGACGGATGGGCCCTTGGTGGAAGCTGAAGAGACGGTGACCGTTGTCCC131030.2833176030764274No Hit
AAGACCGATGGGCCCTTGGTGGAGGCGGAGGAGACGGTGACCAGGGTTCC126760.2740848612223761No Hit
AAGACGGATGGGCCCTTGGTGGAAGCTGACGAGACGGTGACCAAGAATCC111870.24188918763763975No Hit
AAGACGGATGGGCCCTTGGTGGAGGCTGAAGAGACGGTGACCATTGTCCC105440.2279860189909067No Hit
AAGACGGATGGGCCCTTGGTGGAGGCTGAGGAGACGGTGACCAGGATTCC104990.22701301340909805No Hit
AAGACGGATGGGCCCTTGGTGGAGGCTGAGGAGACGATGACCGGGGTTCC95390.20625556099717937No Hit
AAGACGGATGGGCCCTTGGTGGAAGCTGAGGTGACGGTGACCGTGGTCCC77110.16672991202948423No Hit
AAGACGGATGGGCCCTTGGTGGAGGCGGAGGAGACGGTGACCAGGGTTCC68380.14785360374239567No Hit
AAGACCGATAGGCCCTTGGTGGAGGCTGAGGAGACGGTGACCGTGGTCCC65700.14205881494406838No Hit
AAGACCGATGGGCCCTTGGTGGAGGCTGAGTAGACGCTGACCGTGGTCCC64850.1402209155117631No Hit
AAGACCGATGGGCCCTTGGTGGAAGCCGAGGAGACGGTGACCAGGTTTCC60030.12979894461327893No Hit
AAGACCGATGAGCCCTTGGTGGAGGCTGAGGAGACGGTGACCGTGGTCCC58760.12705290663795218No Hit
AAGACCGATGCGCCCTTGGTGGAGGCTGAGGAGACGGTGACCGTGGTCCC58260.12597178932483144No Hit
AAGACCGATGGGCCCTTGGTGGAGGCTGAGGAGACGGTGACCATGGTCCC50570.10934420504903407No Hit
AAGACCGATGGGCCCTTGGTGGAGGCTGAGGAGACGGTGACCGGGGTCCC49700.10746306092420395No Hit
AAGAGCGATGGGCCCTTGGTGGAGGCTGAGGAGACGGTGACCGTGGTCCC47810.10337643748060746No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)