FastQCFastQC Report
Mon 5 Sep 2022
EGAF00001880180

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00001880180
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences4604722
Sequences flagged as poor quality0
Sequence length250
%GC55

[WARN]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
AAGACCGATGGGCCCTTGGTGGAGGCTGAGGAGACGGTGACCAGGGTTCC82542717.925664133469947No Hit
AAGACGGATGGGCCCTTGGTGGAGGCTGAGGAGACGGTGACCAGGGTTCC4426939.613892000429125No Hit
AAGACCGATGGGCCCTTGGTGGAGGCTGAGGAGACGGTGACCGGGGTTCC828771.7998263521663196No Hit
AAGACCGATGGGCCCTTGGTGGAAGCTGAGGAGACGGTGACCAGGGTTCC824511.790574979336429No Hit
AAGACCGATGGGCCCTTGGTGGAGGCTGAGGAGACGGTGACCGTGGTCCC797571.732069818764303No Hit
AAGACCGATGGGCCCTTGGTGGAGGCTGAGGAGACGGTGACCAGGGATCC746371.620879610104584No Hit
AAGACCGATGGGCCCTTGGTGGAGGCTGTGGCTGCCTTGCCCTGTGCTCT663951.4418894343675905No Hit
AAGACCGATGGGCCCTTGGTGGAGGCCGAGGAGACGGTGACCGGGGTTCC587991.276928335738835No Hit
AAGACCGATGGGCCCTTGGTGGAGGCAGAGGCGACGATGACCGTGGTCCC525561.1413501184219155No Hit
AAGACCGATGGGCCCTTGGTGGAGGCTGAAGAGACGGTGACCAGTGTCCC447550.9719370680792457No Hit
AAGACGGATGGGCCCTTGGTGGAGGCTGAGGAGACGGTGACCGGGGTTCC437670.9504808325019404No Hit
AAGACGGATGGGCCCTTGGTGGAAGCTGAGGAGACGGTGACCAGGGTTCC425540.9241383084581436No Hit
AAGACGGATGGGCCCTTGGTGGAGGCTGAGGAGACGGTGACCGTGGTCCC414330.8997937334762013No Hit
AAGACGGATGGGCCCTTGGTGGAGGCTGAGGAGACGGTGACCAGGGATCC395010.8578368031772601No Hit
AAGACGGATGGGCCCTTGGTGGAGGCTGTGGCTGCCTTGCCCTGTGCTCT351080.7624347354737159No Hit
AAGACGGATGGGCCCTTGGTGGAGGCCGAGGAGACGGTGACCGGGGTTCC311240.6759148543603718No Hit
AAGACGGATGGGCCCTTGGTGGAGGCAGAGGCGACGATGACCGTGGTCCC285360.6197116785769043No Hit
AAGACCGATGGGCCCTTGGTGGAGGCTGACGAGGCGGTGACCGAGGAGAC269250.5847258531568247No Hit
AAGACGGATGGGCCCTTGGTGGAGGCTGAAGAGACGGTGACCAGTGTCCC240500.5222899449738768No Hit
AAGACCGATGGGCCCTTGGTGGAGGCTGAGGAGACGGTGACCGTAGTCCC211970.4603318072187637No Hit
AAGACGGATGGGCCCTTGGTGGAGGCTGACGAGGCGGTGACCGAGGAGAC137550.2987151015848514No Hit
AAGACGGATGGGCCCTTGGTGGAGGCTGAGGAGACGGTGACCGTAGTCCC112740.24483562742767098No Hit
AAGACCGATAGGCCCTTGGTGGAGGCTGAGGAGACGGTGACCAGGGTTCC103980.22581167766479712No Hit
AAGACCGATGCGCCCTTGGTGGAGGCTGAGGAGACGGTGACCAGGGTTCC103220.22416119800500442No Hit
AAGACCGATGAGCCCTTGGTGGAGGCTGAGGAGACGGTGACCAGGGTTCC102080.22168547851531537No Hit
AAGACCGATGGGCCCTTGGTGGAGGCCGAGGCGACGATGACCGTGGTCCC97720.21221693730913613No Hit
AAGAGCGATGGGCCCTTGGTGGAGGCTGAGGAGACGGTGACCAGGGTTCC84790.18413706625503126No Hit
AAGACCGATGGGCCCATGGTGGAGGCTGAGGAGACGGTGACCAGGGTTCC75400.16374495572153974No Hit
AAGACCGATGGACCCTTGGTGGAGGCTGAGGAGACGGTGACCAGGGTTCC60970.13240755902310716No Hit
AAGACCGATCGGCCCTTGGTGGAGGCTGAGGAGACGGTGACCAGGGTTCC59330.12884599765197552No Hit
AAGACGGATAGGCCCTTGGTGGAGGCTGAGGAGACGGTGACCAGGGTTCC56950.12367739029630886No Hit
AAGATCGATGGGCCCTTGGTGGAGGCTGAGGAGACGGTGACCAGGGTTCC55580.12070218354115624No Hit
AAGACGGATGAGCCCTTGGTGGAGGCTGAGGAGACGGTGACCAGGGTTCC55530.12059359935301198No Hit
AAGACGGATGCGCCCTTGGTGGAGGCTGAGGAGACGGTGACCAGGGTTCC55360.12022441311332151No Hit
AAGACGGATGGGCCCTTGGTGGAGGCCGAGGCGACGATGACCGTGGTCCC53610.1164239665282725No Hit
AAGACCGATGGGCCCTTGGTGGAGACTGAGGAGACGGTGACCAGGGTTCC51940.11279725464425432No Hit
AAGACCGATGGGCCCCTGGTGGAGGCTGAGGAGACGGTGACCAGGGTTCC47310.1027423588220961No Hit
AAGACCGATGGGACCTTGGTGGAGGCTGAGGAGACGGTGACCAGGGTTCC46470.10091814446127258No Hit
AAGACCGATGGGCCCTTGGTGGAGGCTGAGGAGACGGTGACCAGGGTCCC46220.1003752235205513No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)