FastQCFastQC Report
Tue 13 Sep 2022
EGAF00001880181

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00001880181
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences2317397
Sequences flagged as poor quality0
Sequence length250
%GC54

[WARN]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
AAGACCGATGGGCCCTTGGTGGAGGCTGAGGAGACGGTGACCAGGGTTCC24215010.449223848999546No Hit
AAGACGGATGGGCCCTTGGTGGAGGCTGAGGAGACGGTGACCAGGGTTCC1128154.868177528494255No Hit
AAGACCGATGGGCCCTTGGTGGAGGCTGAAGAGACGGTGACCATTGTCCC308451.3310192427106793No Hit
AAGACCGATGGGCCCTTGGTGGAGGCTGAGGAGACGGTGACCGTGGTCCC290261.2525260022344034No Hit
AAGACGGATGGGCCCTTGGTGGAAGCTGAGGAGACGGTGACCAGGGTTCC237271.0238642753054397No Hit
AAGACCGATGGGCCCTTGGTGGAGGCTGAGGAGACGGTGACCAGGGTGCC185950.8024089096516479No Hit
AAGACCGATGGGCCCTTGGTGGAGGCTGAGGAGACGGTGACCAGGGCTCC171000.7378968730864846No Hit
AAGACGGATGGGCCCTTGGTGGAGGCTGAAGAGACGGTGACCATTGTCCC148890.6424881019523198No Hit
AAGACGGATGGGCCCTTGGTGGAGGCTGAGGAGACGGTGACCGTGGTCCC140790.6075350921745389No Hit
AAGACCGATGGGCCCTTGGTGGAGGCTGAGGAGACGGTGACCAGGCTTCC119450.5154490145624595No Hit
AAGACCGATGGGCCCTTGGTGGAGGCTGAGGAGACGGTGACCATTGTCCC100300.4328131951495579No Hit
AAGACCGATGGGCCCTTGGTGGAGGCTGAGGAGACGATGGCCAGGGTTCC84800.36592780606861924No Hit
AAGACGGATGGGCCCTTGGTGGAGGCTGAGGAGACGGTGACCAGGGTGCC84520.36471955387877No Hit
AAGACGGATGGGCCCTTGGTGGAGGCTGAGGAGACGGTGACCAGGGCTCC82180.3546220177207445No Hit
AAGACCGATGGGCCCTTGGTGGAGGTTGAAGAGACGGTGACCGTTGTCCC80670.34810608626834333No Hit
AAGACCGATGGGCCCTTGGTGGAAGCTGAGGAGACGGTGACCAGGGTTCC76440.3298528478288355No Hit
AAGACCGATGGGCCCTTGGTGGAGGCTGAGGAGACAGTGACCAGGGTGCC70760.30534258912046575No Hit
AAGACCGATGGGCCCTTGGTGGAGGCTGAGGAGACGGTGACCAGGATTCC68700.2964533051522894No Hit
AAGACCGATGGGCCCTTGGTGGAGGCGGAGGAGACGGTGACCAGGGTTCC64940.2802282043171714No Hit
AAGACCGATGGGCCCTTGGTGGAGGCTGAGGAGACGGTGACCCGGGTTCC61320.26460722957697796No Hit
AAGACCGATGGGCCCTTGGTGGAGGCTGAGGAGACGGTGACTAGGGTTCC60910.2628380031561273No Hit
AAGACCGATGGGCCCTTGGTGGAGGCTGAGGAGACGGTGACCGGGGTTCC56890.2454909538590065No Hit
AAGACGGATGGGCCCTTGGTGGAGGCTGAGGAGACGGTGACCAGGCTTCC55080.23768046648890975No Hit
AAGACCGATGGGCCCTTGGTGGAGGCTGAGGAGACAGCGACCAGGGTGCC51860.22378556630564378No Hit
AAGACGGATGGGCCCTTGGTGGAGGCTGAGGAGACGGTGACCATTGTCCC48890.21096946272045747No Hit
AAGACCGATGGGCCCTTGGTGGAGGCTGAGGAGACGGTGACAAGTGTTCC47310.20415146822059405No Hit
AAGACCGATGGGCCCTTGGTGGAGGCTGATGAGACGATGACCTGGGTTCC45230.19517588052457133No Hit
AAGACGGATGGGCCCTTGGTGGAGGCTGAGGAGACGATGGCCAGGGTTCC41530.1792096908729924No Hit
AAGACCGATGGGCCCTTGGTGGAGGCTGAGGAGACGGCGACCAGGGTTCC40110.17308212619589997No Hit
AAGACCGATGGGCCCTTGGTGGAGGCTAAGGAGACGGTGACCAGGGTTCC39540.17062246995227837No Hit
AAGACCGATGGGCCCTTGGTGGAGGCTGAGGAGACAGTGACCAGGGTTCC39250.16937106589850595No Hit
AAGACCGATGGGCCCTTGGTGGAGGCGGAGGAGACGATGACCGTGGTCCC39140.1688963953953509No Hit
AAGACCGATGGGCCCTTGGTGGAGGCTGAAGAGACGGTGACCAGGGTTCC37070.15996395956325135No Hit
AAGACCGATGGGCCCTTGGTGGAGGCTGACGAGACGGTGACCAGGGTTCC36370.15694332908862832No Hit
AAGACGGATGGGCCCTTGGTGGAGGTTGAAGAGACGGTGACCGTTGTCCC35240.1520671684653083No Hit
AAGACCGATGGGCCCTTGGTGGAGGCTGAGGAGACGGTGACCAGAGTTCC34990.15098837186722863No Hit
AAGACCGATGGGCCCTTGGTGGAGGCCGAGGAGACGGTGACCAGGGTTCC34760.14999587899699535No Hit
AAGACGGATGGGCCCTTGGTGGAGGCTGAGGAGACGGTGACCAGGATTCC34210.1476225264812201No Hit
AAGACCGATAGGCCCTTGGTGGAGGCTGAGGAGACGGTGACCAGGGTTCC32750.1413223543484349No Hit
AAGACGGATGGGCCCTTGGTGGAGGCGGAGGAGACGGTGACCAGGGTTCC32390.1397688872472002No Hit
AAGACCGATGGGCCCTTGGTGGAGGCTGAAGAGACGGTGACCACTGTCCC32280.13929421674404516No Hit
AAGACGGATGGGCCCTTGGTGGAGGCTGAGGAGACAGTGACCAGGGTGCC32060.13834487573773505No Hit
AAGACCGATGGGCCCTTGGTGGAGGCTGAGGAGACGATGACCAGGGTTCC31910.13769759777888727No Hit
AAGACCGATGAGCCCTTGGTGGAGGCTGAGGAGACGGTGACCAGGGTTCC31670.1366619530447308No Hit
AAGACCGATGCGCCCTTGGTGGAGGCTGAGGAGACGGTGACCAGGGTTCC31480.13584206763019024No Hit
AAGACCGATGGGCCCTTGGTGGAGGCTGCGGAGACGGTGACTAGGGTACC31460.1357557639023439No Hit
AAGACGGATGGGCCCTTGGTGGAAGCTGAGGGGACGGTGACCAGGATGCC31070.1340728412093396No Hit
AAGACCGATGGGCCCTTGGTGGAGGCTGAGGAGACAGTGACTAGGGTTCC31000.13377077816187732No Hit
AAGACCGATGGGCCCTTGGTGGAGGCTGAGGAGACGATGACCAGGGCTCC30100.12988711040879056No Hit
AAGACCGATGGGCCCTTGGTGGAGGCTGAGGAGACGGTGACCGCGGATCC28720.12393215318739084No Hit
AAGACGGATGGGCCCTTGGTGGAAGCTGAGGAGACGGTGACGAGGGTTCC28160.12151564880769242No Hit
AAGACGGATGGGCCCTTGGTGGAGGCTGAGGAGACGGTGACTAGGGTTCC28060.12108413016846055No Hit
AAGACGGATGGGCCCTTGGTGGAGGCTGAGGAGACGGTGACCCGGGTTCC27880.1203073966178432No Hit
AAGACCGATGGGCCCTTGGTGGAGGCTGAGGAGACGGTGACCAGGACTCC27540.11884023324445488No Hit
AAGACCGATGGGCCCTTGGTGGAGGCTGAGGAGACGCTGACCGTGGTCCC27400.11823610714953028No Hit
AAGACCGATGGGCCCTTGGTGGAGGCTGAGGAGACGGTGACCTGGGTTCC27260.11763198105460566No Hit
AAGACGGATGGGCCCTTGGTGGAAGCTGAGGAGACGGTGACCAGGACTCC27140.11711415868752742No Hit
AAGACGGATGGGCCCTTGGTGGAGGCTGAGGAGACGGTGACCGGGGTTCC27010.116553184456526No Hit
AAGACCGATGGGCCCTTGGTGGAGGCTGCGGAGACGGTGACCAGGGTTCC26130.11275582043128562No Hit
AAGACCGATGGGCCCTTGGTGGAGGCTGAGGAGACGGTGACCAGGGTCCC25830.11146126451359002No Hit
AAGACCGATGGGCCCTTGGTGGAGGCTGAGGAGACGGTCACTAGGGTGCC25470.10990779741235533No Hit
AAGACCGATGGGCCCTTGGTGGAGGCTGCAAGAGAGGTGGTGCCATGTGA25060.10813857099150469No Hit
AAGACCGATGGGCCCTTGGTGGAGGCTGACGAGACGATGACCAGACTTCC24850.10723238184911779No Hit
AAGAGCGATGGGCCCTTGGTGGAGGCTGAGGAGACGGTGACCAGGGTTCC24450.10550630729219033No Hit
AAGACCGATGGGCCCTTGGTGGAGGCTGAGGAGACGGTGAGCAGGGTTCC24140.10416859951057156No Hit
AAGACGGATGGGCCCTTGGTGGAGGCTGAGGAGACAGCGACCAGGGTGCC24120.10408229578272518No Hit
AAGACGGATGGGCCCTTGGTGGAAGCTGAGGAGACGATGACCAGGCTTCC24040.10373708087133969No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)