FastQCFastQC Report
Tue 13 Sep 2022
EGAF00001880184

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00001880184
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences2456390
Sequences flagged as poor quality0
Sequence length250
%GC54

[WARN]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
AAGACCGATGGGCCCTTGGTGGAGGCTGAGGAGACGGTGACCAGGGTTCC36093414.693676492739346No Hit
AAGACGGATGGGCCCTTGGTGGAGGCTGAGGAGACGGTGACCAGGGTTCC1862717.583119944308518No Hit
AAGACCGATGGGCCCTTGGTGGAGGCTGAGGAGACGGTGACCGTGGTCCC847253.4491672739263715No Hit
AAGACCGATGGGCCCTTGGTGGAGGCTGAAGAGACGGTGACCATTGTCCC630432.5664898489246415No Hit
AAGACGGATGGGCCCTTGGTGGAGGCTGAGGAGACGGTGACCGTGGTCCC438621.7856285036170965No Hit
AAGACGGATGGGCCCTTGGTGGAGGCTGAAGAGACGGTGACCATTGTCCC330101.3438419794902277No Hit
AAGACCGATGGGCCCTTGGTGGAGGCTGCAAGAGAGGTGGTGCCATGTGA242570.987506055634488No Hit
AAGACCGATGGGCCCTTGGTGGAGGCTGAGGAGACGGTGACCAGGATTCC180560.7350624290116797No Hit
AAGACGGATGGGCCCTTGGTGGAAGCTGCAAGAGAGGTGGTGCCATGTGA175070.7127125578592977No Hit
AAGACCGATGGGCCCTTGGTGGAGGCTGAGGAGACGGTGACCAGGGTGCC160940.6551891189916911No Hit
AAGACCGATGGGCCCTTGGTGGAGGCTGCGGAGACGACGACCGACGTTCC146830.5977471004197216No Hit
AAGACGGATGGGCCCTTGGTGGAGGCTGCAAGAGAGGTGGTGCCATGTGA123210.5015897312723142No Hit
AAGACGGATGGGCCCTTGGTGGAAGCTGAGGAGACGGTGACCAGGGTTCC120720.4914529044654961No Hit
AAGACCGATGGGCCCTTGGTGGAGGCTGAGGAGACGGTGACCATGGTCCC107190.43637207446700244No Hit
AAGACCGATGGGCCCTTGGTGGAAGCTGCAAGAGAGATGGCGCCATGTGA103230.4202508559308579No Hit
AAGACGGATGGGCCCTTGGTGGAGGCTGAGGAGACGGTGACCAGGATTCC92160.37518472229572664No Hit
AAGACCGATGGGCCCTTGGTGGAGGCTGAGGAGACGCTGACCGTGGTCCC85030.34615838690110284No Hit
AAGACGGATGGGCCCTTGGTGGAGGCTGAGGAGACGGTGACCAGGGTGCC83210.33874913999812734No Hit
AAGACGGATGGGCCCTTGGTGGAGGCTGCGGAGACGACGACCGACGTTCC77370.31497441367209605No Hit
AAGACCGATGGGCCCTTGGTGGAGGCTGAGGAGACGCTGACCAGGGTTCC69360.2823655852694401No Hit
AAGACCGATGGGCCCTTGGTGGAGGCTGACGAGACGGTGACCAGGGTTCC64440.2623361925427151No Hit
AAGACCGATGGGCCCTTGGTGGAGGTTGAGGAGACGGTGACCGTGGTCCC63580.2588351198303201No Hit
AAGACCGATGGGCCCTTGGTGGAAGCTGAGGAGACGGTGACCAGGGTTCC57100.23245494404390182No Hit
AAGACGGATGGGCCCTTGGTGGAGGCTGAGGAGACGGTGACCATGGTCCC54530.2219924360545353No Hit
AAGACGGATGGGCCCTTGGTGGAAGCTGCAAGAGAGATGGCGCCATGTGA54460.2217074650198055No Hit
AAGACCGATGGGCCCTTGGTGGAGGCCGAGGAGACGGTGACCAGGGTTCC52400.21332117456918484No Hit
AAGACCGATAGGCCCTTGGTGGAGGCTGAGGAGACGGTGACCAGGGTTCC48810.19870623150232658No Hit
AAGACCGATGGGCCCTTGGTGGAGGCTGAGGAGACGATGGCCAGGGTTCC47380.19288468036427442No Hit
AAGACGGATGGGCCCTTGGTGGAGGCTGAGGAGACGCTGACCGTGGTCCC45410.1848647812440207No Hit
AAGACCGATGCGCCCTTGGTGGAGGCTGAGGAGACGGTGACCAGGGTTCC44640.1817300998619926No Hit
AAGACCGATGAGCCCTTGGTGGAGGCTGAGGAGACGGTGACCAGGGTTCC44610.18160796941853696No Hit
AAGACCGATGGGCCCTTGGTGGAGGCTGAGGAGACGGTGAGCAGGGTTCC42280.17212250497681558No Hit
AAGACCGATGGGCCCTTGGTGGAGGCTGCGGAGACGGTGACCAGGGTTCC42240.1719596643855414No Hit
AAGACCGATGGGCCCTTGGTGGAGGCTGAGGAGACGGTGACCAGGGCTCC41280.16805149019496088No Hit
AAGACCGATGGGCCCTTGGTGGAAGCTGCAAGAGAGGTGGTGCCATGTGA40510.1649168088129328No Hit
AAGACCGATGGGCCCTTGGTGGAGGCTGAGGAGACGGTGATCAGGGTTCC38780.15787395324032422No Hit
AAGAGCGATGGGCCCTTGGTGGAGGCTGAGGAGACGGTGACCAGGGTTCC37470.15254092387609458No Hit
AAGACCGATGGGCCCTTGGTGGAGGCTGGGGAGACGCTGACCAGGGTTCC37420.15233737313700185No Hit
AAGACCGATGGGCCCTTGGTGGAAGCTGAGGAGACGGTGACCGTGGTCCC37370.15213382239790912No Hit
AAGACCGATGGGCCCTTGGTGGAGGCTGAGGAGACGGTGACCGGGGTTCC35580.14484670593838928No Hit
AAGACGGATGGGCCCTTGGTGGAGGCTGAGGAGACGCTGACCAGGGTTCC35070.14277048839964337No Hit
AAGACGGATGGGCCCTTGGTGGAGGCTGACGAGACGGTGACCAGGGTTCC32190.1310459658279019No Hit
AAGACCGATGGGCCCTTGGTGGAGGCTGTGGAGACGGTGACCAGGGTTCC32040.13043531361062372No Hit
AAGACGGATGGGCCCTTGGTGGAAGCTGTGGAGACGGTGACCGTGGTCCC31960.13010963242807533No Hit
AAGACCGATGGGCCCTTGGTGGAGGTTGAGGAGACGGTGACCAGGGTTCC31240.12717850178513998No Hit
AAGACGGATGGGCCCTTGGTGGAGGTTGAGGAGACGGTGACCGTGGTCCC30590.12453234217693444No Hit
AAGACCGATGGGCCCTTGGTGGAGGCTGAGGAGACGGTGACCAGGCTTCC30340.12351458848147079No Hit
AAGACCGATGGGCCCTTGGTGGAGGCTGAGGAGACGGTGACAAGGGTTCC30160.12278180582073693No Hit
AAGACCGATGGGCCCTTGGTGGAGGCTGAGGAGACGGTGACCGGGGTCCC29610.12054274769071688No Hit
AAGACGGATGGGCCCTTGGTGGAAGCTGAAGAGACGGTGACCGTGGCCCC29030.11818155911724115No Hit
AAGACGGATGGGCCCTTGGTGGAGGCCGAGGAGACGGTGACCAGGGTTCC28370.11549468936121705No Hit
AAGACCGATGGGCCCTTGGTGGAGGCTGAAGAGACGGTGACCAGGGTTCC28150.11459906610920906No Hit
AAGACCGATCGGCCCTTGGTGGAGGCTGAGGAGACGGTGACCAGGGTTCC27190.11069089191862856No Hit
AAGACCGATGGGCCCTTGGTGGAGGCTGAGGAGACGGTGACCTGGGTTCC27110.11036521073608017No Hit
AAGACGGATGGGCCCTTGGTGGAAGCTGACGAGACGATGACAGTGGTCCC26370.10735265979750772No Hit
AAGACCGATGGACCCTTGGTGGAGGCTGAGGAGACGGTGACCAGGGTTCC26340.10723052935405208No Hit
AAGACCGATGGGCCCTTGGTGGAGGCTAAGGAGACGGTGACCAGGGTTCC26100.10625348580640696No Hit
AAGACCGATGGGCCCTTGGTGGAGGCTGAGGAGACGATGACCGTGGTCCC26080.10617206551076987No Hit
AAGACCGATGGGCCCTTGGTGGAGGCTGAGGAGACGGTGACCAGGGTCCC25800.10503218137185057No Hit
AAGACGGATGGGCCCTTGGTGGAGGCTGAGGAGACGATGGCCAGGGTTCC25620.10429939871111672No Hit
AAGACCGATGGGCCCATGGTGGAGGCTGAGGAGACGGTGACCAGGGTTCC25520.10389229723293127No Hit
AAGACCGATGGGCCCTTGGTGGAGACTGAGGAGACGGTGACCAGGGTTCC25200.10258957250273776No Hit
AAGACCGATGGGCCCTTGGTGGAGGCTGGGGCGACGGTGACCGCGGTCCC25020.1018567898420039No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)